Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav6d-5A0A075B6B9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav6d-5A0A075B6B9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav6d-5A0A075B6B9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav6d-5A0A075B6B9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav6d-5A0A075B6B9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.46■□□□□ 0.87
Trav6d-5A0A075B6B9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav6d-5A0A075B6B9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav6d-5A0A075B6B9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav6d-5A0A075B6B9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav6d-5A0A075B6B9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav6d-5A0A075B6B9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6d-5A0A075B6B9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6d-5A0A075B6B9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6d-5A0A075B6B9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6d-5A0A075B6B9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6d-5A0A075B6B9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trav6d-5A0A075B6B9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6d-5A0A075B6B9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.41■□□□□ 0.86
Trav6d-5A0A075B6B9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6d-5A0A075B6B9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6d-5A0A075B6B9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav6d-5A0A075B6B9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav6d-5A0A075B6B9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trav6d-5A0A075B6B9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.39■□□□□ 0.85
Trav6d-5A0A075B6B9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trav6d-5A0A075B6B9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trav6d-5A0A075B6B9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6d-5A0A075B6B9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6d-5A0A075B6B9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trav6d-5A0A075B6B9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav6d-5A0A075B6B9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav6d-5A0A075B6B9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav6d-5A0A075B6B9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6d-5A0A075B6B9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6d-5A0A075B6B9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6d-5A0A075B6B9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav6d-5A0A075B6B9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trav6d-5A0A075B6B9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav6d-5A0A075B6B9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trav6d-5A0A075B6B9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trav6d-5A0A075B6B9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.32■□□□□ 0.84
Trav6d-5A0A075B6B9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trav6d-5A0A075B6B9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav6d-5A0A075B6B9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav6d-5A0A075B6B9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav6d-5A0A075B6B9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav6d-5A0A075B6B9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav6d-5A0A075B6B9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav6d-5A0A075B6B9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav6d-5A0A075B6B9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav6d-5A0A075B6B9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav6d-5A0A075B6B9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav6d-5A0A075B6B9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.26■□□□□ 0.83
Trav6d-5A0A075B6B9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6d-5A0A075B6B9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Trav6d-5A0A075B6B9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav6d-5A0A075B6B9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav6d-5A0A075B6B9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav6d-5A0A075B6B9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6d-5A0A075B6B9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6d-5A0A075B6B9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6d-5A0A075B6B9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6d-5A0A075B6B9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Trav6d-5A0A075B6B9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.22■□□□□ 0.83
Trav6d-5A0A075B6B9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Trav6d-5A0A075B6B9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6d-5A0A075B6B9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6d-5A0A075B6B9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav6d-5A0A075B6B9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.2■□□□□ 0.82
Trav6d-5A0A075B6B9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav6d-5A0A075B6B9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav6d-5A0A075B6B9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Trav6d-5A0A075B6B9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.19■□□□□ 0.82
Trav6d-5A0A075B6B9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav6d-5A0A075B6B9 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.18■□□□□ 0.82
Trav6d-5A0A075B6B9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav6d-5A0A075B6B9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav6d-5A0A075B6B9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav6d-5A0A075B6B9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav6d-5A0A075B6B9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav6d-5A0A075B6B9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trav6d-5A0A075B6B9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav6d-5A0A075B6B9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav6d-5A0A075B6B9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav6d-5A0A075B6B9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trav6d-5A0A075B6B9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.11■□□□□ 0.81
Trav6d-5A0A075B6B9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav6d-5A0A075B6B9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.1■□□□□ 0.81
Trav6d-5A0A075B6B9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6d-5A0A075B6B9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6d-5A0A075B6B9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6d-5A0A075B6B9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6d-5A0A075B6B9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav6d-5A0A075B6B9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav6d-5A0A075B6B9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav6d-5A0A075B6B9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav6d-5A0A075B6B9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Trav6d-5A0A075B6B9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav6d-5A0A075B6B9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms