Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.67■□□□□ 0.9
Trav18A0A075B656 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav18A0A075B656 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav18A0A075B656 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav18A0A075B656 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Trav18A0A075B656 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.62■□□□□ 0.89
Trav18A0A075B656 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trav18A0A075B656 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav18A0A075B656 Gm8109-201ENSMUST00000194076 746 ntBASIC20.61■□□□□ 0.89
Trav18A0A075B656 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Trav18A0A075B656 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav18A0A075B656 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.6■□□□□ 0.89
Trav18A0A075B656 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav18A0A075B656 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav18A0A075B656 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Trav18A0A075B656 Gm26115-201ENSMUST00000175605 87 ntBASIC20.59■□□□□ 0.89
Trav18A0A075B656 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trav18A0A075B656 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.55■□□□□ 0.88
Trav18A0A075B656 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav18A0A075B656 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trav18A0A075B656 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav18A0A075B656 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav18A0A075B656 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav18A0A075B656 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav18A0A075B656 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav18A0A075B656 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav18A0A075B656 Amer2-203ENSMUST00000225247 2662 ntBASIC20.52■□□□□ 0.88
Trav18A0A075B656 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trav18A0A075B656 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trav18A0A075B656 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.5■□□□□ 0.87
Trav18A0A075B656 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav18A0A075B656 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Trav18A0A075B656 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav18A0A075B656 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav18A0A075B656 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav18A0A075B656 Peli2-204ENSMUST00000226513 1320 ntBASIC20.49■□□□□ 0.87
Trav18A0A075B656 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav18A0A075B656 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav18A0A075B656 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav18A0A075B656 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav18A0A075B656 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav18A0A075B656 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav18A0A075B656 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav18A0A075B656 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav18A0A075B656 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Trav18A0A075B656 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav18A0A075B656 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav18A0A075B656 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav18A0A075B656 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav18A0A075B656 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.42■□□□□ 0.86
Trav18A0A075B656 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav18A0A075B656 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.42■□□□□ 0.86
Trav18A0A075B656 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trav18A0A075B656 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav18A0A075B656 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav18A0A075B656 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav18A0A075B656 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav18A0A075B656 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav18A0A075B656 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav18A0A075B656 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trav18A0A075B656 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav18A0A075B656 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trav18A0A075B656 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.37■□□□□ 0.85
Trav18A0A075B656 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav18A0A075B656 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav18A0A075B656 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav18A0A075B656 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav18A0A075B656 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav18A0A075B656 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trav18A0A075B656 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Trav18A0A075B656 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav18A0A075B656 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav18A0A075B656 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Trav18A0A075B656 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav18A0A075B656 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav18A0A075B656 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav18A0A075B656 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav18A0A075B656 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.31■□□□□ 0.84
Trav18A0A075B656 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trav18A0A075B656 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trav18A0A075B656 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav18A0A075B656 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav18A0A075B656 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav18A0A075B656 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav18A0A075B656 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav18A0A075B656 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav18A0A075B656 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav18A0A075B656 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav18A0A075B656 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav18A0A075B656 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.27■□□□□ 0.84
Trav18A0A075B656 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.26■□□□□ 0.83
Trav18A0A075B656 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trav18A0A075B656 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms