Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.67■□□□□ 0.9
Trav18A0A075B656 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav18A0A075B656 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav18A0A075B656 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav18A0A075B656 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Trav18A0A075B656 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.62■□□□□ 0.89
Trav18A0A075B656 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trav18A0A075B656 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav18A0A075B656 Gm8109-201ENSMUST00000194076 746 ntBASIC20.61■□□□□ 0.89
Trav18A0A075B656 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Trav18A0A075B656 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav18A0A075B656 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.6■□□□□ 0.89
Trav18A0A075B656 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav18A0A075B656 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav18A0A075B656 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Trav18A0A075B656 Gm26115-201ENSMUST00000175605 87 ntBASIC20.59■□□□□ 0.89
Trav18A0A075B656 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav18A0A075B656 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trav18A0A075B656 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.55■□□□□ 0.88
Trav18A0A075B656 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav18A0A075B656 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trav18A0A075B656 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav18A0A075B656 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav18A0A075B656 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav18A0A075B656 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav18A0A075B656 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav18A0A075B656 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav18A0A075B656 Amer2-203ENSMUST00000225247 2662 ntBASIC20.52■□□□□ 0.88
Trav18A0A075B656 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trav18A0A075B656 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trav18A0A075B656 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.5■□□□□ 0.87
Trav18A0A075B656 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav18A0A075B656 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Trav18A0A075B656 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav18A0A075B656 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav18A0A075B656 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav18A0A075B656 Peli2-204ENSMUST00000226513 1320 ntBASIC20.49■□□□□ 0.87
Trav18A0A075B656 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav18A0A075B656 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav18A0A075B656 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav18A0A075B656 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav18A0A075B656 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav18A0A075B656 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav18A0A075B656 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav18A0A075B656 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav18A0A075B656 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Trav18A0A075B656 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav18A0A075B656 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav18A0A075B656 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav18A0A075B656 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav18A0A075B656 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.42■□□□□ 0.86
Trav18A0A075B656 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav18A0A075B656 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.42■□□□□ 0.86
Trav18A0A075B656 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trav18A0A075B656 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav18A0A075B656 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav18A0A075B656 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav18A0A075B656 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav18A0A075B656 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav18A0A075B656 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav18A0A075B656 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trav18A0A075B656 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav18A0A075B656 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trav18A0A075B656 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.37■□□□□ 0.85
Trav18A0A075B656 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav18A0A075B656 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav18A0A075B656 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav18A0A075B656 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav18A0A075B656 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav18A0A075B656 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trav18A0A075B656 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Trav18A0A075B656 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav18A0A075B656 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav18A0A075B656 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Trav18A0A075B656 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav18A0A075B656 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav18A0A075B656 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav18A0A075B656 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav18A0A075B656 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.31■□□□□ 0.84
Trav18A0A075B656 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trav18A0A075B656 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trav18A0A075B656 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav18A0A075B656 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav18A0A075B656 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav18A0A075B656 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav18A0A075B656 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav18A0A075B656 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav18A0A075B656 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav18A0A075B656 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav18A0A075B656 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav18A0A075B656 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.27■□□□□ 0.84
Trav18A0A075B656 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.26■□□□□ 0.83
Trav18A0A075B656 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trav18A0A075B656 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms