Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trav12-3A0A075B648 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav12-3A0A075B648 Gm24109-201ENSMUST00000175489 103 ntBASIC18.56■□□□□ 0.56
Trav12-3A0A075B648 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav12-3A0A075B648 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.53■□□□□ 0.56
Trav12-3A0A075B648 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Trav12-3A0A075B648 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav12-3A0A075B648 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav12-3A0A075B648 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav12-3A0A075B648 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav12-3A0A075B648 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav12-3A0A075B648 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav12-3A0A075B648 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trav12-3A0A075B648 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trav12-3A0A075B648 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trav12-3A0A075B648 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav12-3A0A075B648 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trav12-3A0A075B648 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.47■□□□□ 0.55
Trav12-3A0A075B648 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12-3A0A075B648 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12-3A0A075B648 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12-3A0A075B648 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav12-3A0A075B648 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav12-3A0A075B648 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav12-3A0A075B648 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav12-3A0A075B648 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trav12-3A0A075B648 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trav12-3A0A075B648 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav12-3A0A075B648 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav12-3A0A075B648 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav12-3A0A075B648 Gm23366-201ENSMUST00000175022 89 ntBASIC18.38■□□□□ 0.53
Trav12-3A0A075B648 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.38■□□□□ 0.53
Trav12-3A0A075B648 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav12-3A0A075B648 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav12-3A0A075B648 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav12-3A0A075B648 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav12-3A0A075B648 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12-3A0A075B648 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12-3A0A075B648 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.35■□□□□ 0.53
Trav12-3A0A075B648 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12-3A0A075B648 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12-3A0A075B648 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12-3A0A075B648 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12-3A0A075B648 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12-3A0A075B648 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12-3A0A075B648 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Trav12-3A0A075B648 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12-3A0A075B648 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12-3A0A075B648 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.31■□□□□ 0.52
Trav12-3A0A075B648 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trav12-3A0A075B648 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav12-3A0A075B648 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav12-3A0A075B648 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav12-3A0A075B648 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav12-3A0A075B648 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav12-3A0A075B648 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trav12-3A0A075B648 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav12-3A0A075B648 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trav12-3A0A075B648 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.26■□□□□ 0.51
Trav12-3A0A075B648 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12-3A0A075B648 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav12-3A0A075B648 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav12-3A0A075B648 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trav12-3A0A075B648 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.23■□□□□ 0.51
Trav12-3A0A075B648 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav12-3A0A075B648 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav12-3A0A075B648 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav12-3A0A075B648 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav12-3A0A075B648 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav12-3A0A075B648 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav12-3A0A075B648 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav12-3A0A075B648 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trav12-3A0A075B648 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav12-3A0A075B648 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12-3A0A075B648 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12-3A0A075B648 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12-3A0A075B648 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12-3A0A075B648 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Trav12-3A0A075B648 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12-3A0A075B648 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12-3A0A075B648 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12-3A0A075B648 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12-3A0A075B648 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12-3A0A075B648 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12-3A0A075B648 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12-3A0A075B648 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trav12-3A0A075B648 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12-3A0A075B648 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12-3A0A075B648 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12-3A0A075B648 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12-3A0A075B648 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav12-3A0A075B648 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12-3A0A075B648 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12-3A0A075B648 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12-3A0A075B648 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.13■□□□□ 0.49
Trav12-3A0A075B648 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12-3A0A075B648 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12-3A0A075B648 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav12-3A0A075B648 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trav12-3A0A075B648 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms