Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trav4-2A0A075B638 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav4-2A0A075B638 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav4-2A0A075B638 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav4-2A0A075B638 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav4-2A0A075B638 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav4-2A0A075B638 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trav4-2A0A075B638 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav4-2A0A075B638 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav4-2A0A075B638 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trav4-2A0A075B638 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trav4-2A0A075B638 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav4-2A0A075B638 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav4-2A0A075B638 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav4-2A0A075B638 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav4-2A0A075B638 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trav4-2A0A075B638 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav4-2A0A075B638 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.96■□□□□ 0.79
Trav4-2A0A075B638 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav4-2A0A075B638 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.96■□□□□ 0.79
Trav4-2A0A075B638 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav4-2A0A075B638 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trav4-2A0A075B638 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav4-2A0A075B638 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.95■□□□□ 0.78
Trav4-2A0A075B638 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav4-2A0A075B638 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trav4-2A0A075B638 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav4-2A0A075B638 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav4-2A0A075B638 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav4-2A0A075B638 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav4-2A0A075B638 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav4-2A0A075B638 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trav4-2A0A075B638 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav4-2A0A075B638 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav4-2A0A075B638 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav4-2A0A075B638 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav4-2A0A075B638 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav4-2A0A075B638 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav4-2A0A075B638 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav4-2A0A075B638 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav4-2A0A075B638 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Trav4-2A0A075B638 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav4-2A0A075B638 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav4-2A0A075B638 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav4-2A0A075B638 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trav4-2A0A075B638 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trav4-2A0A075B638 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trav4-2A0A075B638 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.85■□□□□ 0.77
Trav4-2A0A075B638 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.85■□□□□ 0.77
Trav4-2A0A075B638 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav4-2A0A075B638 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav4-2A0A075B638 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trav4-2A0A075B638 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav4-2A0A075B638 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.83■□□□□ 0.76
Trav4-2A0A075B638 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav4-2A0A075B638 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav4-2A0A075B638 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.81■□□□□ 0.76
Trav4-2A0A075B638 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trav4-2A0A075B638 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav4-2A0A075B638 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav4-2A0A075B638 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav4-2A0A075B638 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav4-2A0A075B638 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav4-2A0A075B638 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav4-2A0A075B638 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav4-2A0A075B638 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Trav4-2A0A075B638 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.78■□□□□ 0.76
Trav4-2A0A075B638 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav4-2A0A075B638 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav4-2A0A075B638 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav4-2A0A075B638 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav4-2A0A075B638 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trav4-2A0A075B638 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav4-2A0A075B638 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Trav4-2A0A075B638 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav4-2A0A075B638 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav4-2A0A075B638 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav4-2A0A075B638 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav4-2A0A075B638 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav4-2A0A075B638 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav4-2A0A075B638 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav4-2A0A075B638 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav4-2A0A075B638 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav4-2A0A075B638 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav4-2A0A075B638 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav4-2A0A075B638 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav4-2A0A075B638 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trav4-2A0A075B638 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav4-2A0A075B638 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav4-2A0A075B638 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
Trav4-2A0A075B638 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.69■□□□□ 0.74
Trav4-2A0A075B638 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav4-2A0A075B638 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav4-2A0A075B638 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav4-2A0A075B638 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.68■□□□□ 0.74
Trav4-2A0A075B638 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav4-2A0A075B638 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.67■□□□□ 0.74
Trav4-2A0A075B638 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav4-2A0A075B638 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav4-2A0A075B638 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms