Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Trav10nA0A075B622 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.47■■□□□ 1.19
Trav10nA0A075B622 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trav10nA0A075B622 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Trav10nA0A075B622 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trav10nA0A075B622 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Trav10nA0A075B622 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Trav10nA0A075B622 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trav10nA0A075B622 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Trav10nA0A075B622 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trav10nA0A075B622 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trav10nA0A075B622 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trav10nA0A075B622 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trav10nA0A075B622 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Trav10nA0A075B622 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.42■■□□□ 1.18
Trav10nA0A075B622 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trav10nA0A075B622 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trav10nA0A075B622 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trav10nA0A075B622 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trav10nA0A075B622 Gm16148-201ENSMUST00000119653 893 ntBASIC22.38■■□□□ 1.17
Trav10nA0A075B622 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trav10nA0A075B622 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trav10nA0A075B622 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trav10nA0A075B622 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trav10nA0A075B622 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.37■■□□□ 1.17
Trav10nA0A075B622 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Trav10nA0A075B622 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Trav10nA0A075B622 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.33■■□□□ 1.17
Trav10nA0A075B622 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trav10nA0A075B622 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Trav10nA0A075B622 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trav10nA0A075B622 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trav10nA0A075B622 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.29■■□□□ 1.16
Trav10nA0A075B622 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trav10nA0A075B622 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Trav10nA0A075B622 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Trav10nA0A075B622 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Trav10nA0A075B622 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Trav10nA0A075B622 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Trav10nA0A075B622 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trav10nA0A075B622 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Trav10nA0A075B622 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Trav10nA0A075B622 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Trav10nA0A075B622 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trav10nA0A075B622 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trav10nA0A075B622 Zxda-201ENSMUST00000117281 2621 ntBASIC22.22■■□□□ 1.15
Trav10nA0A075B622 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Trav10nA0A075B622 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.21■■□□□ 1.15
Trav10nA0A075B622 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Trav10nA0A075B622 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trav10nA0A075B622 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trav10nA0A075B622 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trav10nA0A075B622 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.19■■□□□ 1.14
Trav10nA0A075B622 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trav10nA0A075B622 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trav10nA0A075B622 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trav10nA0A075B622 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trav10nA0A075B622 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Trav10nA0A075B622 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trav10nA0A075B622 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trav10nA0A075B622 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trav10nA0A075B622 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trav10nA0A075B622 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trav10nA0A075B622 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.13■■□□□ 1.13
Trav10nA0A075B622 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.13■■□□□ 1.13
Trav10nA0A075B622 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trav10nA0A075B622 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Trav10nA0A075B622 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trav10nA0A075B622 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
Trav10nA0A075B622 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trav10nA0A075B622 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Trav10nA0A075B622 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trav10nA0A075B622 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trav10nA0A075B622 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
Trav10nA0A075B622 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trav10nA0A075B622 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trav10nA0A075B622 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.08■■□□□ 1.13
Trav10nA0A075B622 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trav10nA0A075B622 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trav10nA0A075B622 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trav10nA0A075B622 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trav10nA0A075B622 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trav10nA0A075B622 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trav10nA0A075B622 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav10nA0A075B622 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.06■■□□□ 1.12
Trav10nA0A075B622 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Trav10nA0A075B622 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trav10nA0A075B622 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.03■■□□□ 1.12
Trav10nA0A075B622 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trav10nA0A075B622 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trav10nA0A075B622 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Trav10nA0A075B622 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trav10nA0A075B622 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trav10nA0A075B622 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Trav10nA0A075B622 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trav10nA0A075B622 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trav10nA0A075B622 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.99■■□□□ 1.11
Trav10nA0A075B622 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Trav10nA0A075B622 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav10nA0A075B622 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms