Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.33■□□□□ 0.52
Trav13d-1A0A075B606 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav13d-1A0A075B606 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav13d-1A0A075B606 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav13d-1A0A075B606 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13d-1A0A075B606 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.31■□□□□ 0.52
Trav13d-1A0A075B606 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav13d-1A0A075B606 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Trav13d-1A0A075B606 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav13d-1A0A075B606 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav13d-1A0A075B606 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Trav13d-1A0A075B606 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav13d-1A0A075B606 Gm9397-201ENSMUST00000200125 605 ntBASIC18.28■□□□□ 0.52
Trav13d-1A0A075B606 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav13d-1A0A075B606 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav13d-1A0A075B606 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.27■□□□□ 0.52
Trav13d-1A0A075B606 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav13d-1A0A075B606 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trav13d-1A0A075B606 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.26■□□□□ 0.51
Trav13d-1A0A075B606 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13d-1A0A075B606 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav13d-1A0A075B606 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav13d-1A0A075B606 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Trav13d-1A0A075B606 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.23■□□□□ 0.51
Trav13d-1A0A075B606 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trav13d-1A0A075B606 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav13d-1A0A075B606 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav13d-1A0A075B606 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav13d-1A0A075B606 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav13d-1A0A075B606 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav13d-1A0A075B606 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav13d-1A0A075B606 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Trav13d-1A0A075B606 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trav13d-1A0A075B606 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav13d-1A0A075B606 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-1A0A075B606 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-1A0A075B606 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-1A0A075B606 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-1A0A075B606 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.2■□□□□ 0.5
Trav13d-1A0A075B606 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav13d-1A0A075B606 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-1A0A075B606 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13d-1A0A075B606 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13d-1A0A075B606 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.18■□□□□ 0.5
Trav13d-1A0A075B606 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav13d-1A0A075B606 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav13d-1A0A075B606 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav13d-1A0A075B606 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav13d-1A0A075B606 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Trav13d-1A0A075B606 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13d-1A0A075B606 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13d-1A0A075B606 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav13d-1A0A075B606 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13d-1A0A075B606 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13d-1A0A075B606 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav13d-1A0A075B606 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.16■□□□□ 0.5
Trav13d-1A0A075B606 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13d-1A0A075B606 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trav13d-1A0A075B606 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav13d-1A0A075B606 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav13d-1A0A075B606 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-1A0A075B606 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-1A0A075B606 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav13d-1A0A075B606 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-1A0A075B606 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-1A0A075B606 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.12■□□□□ 0.49
Trav13d-1A0A075B606 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13d-1A0A075B606 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13d-1A0A075B606 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13d-1A0A075B606 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav13d-1A0A075B606 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13d-1A0A075B606 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav13d-1A0A075B606 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.1■□□□□ 0.49
Trav13d-1A0A075B606 Zxda-201ENSMUST00000117281 2621 ntBASIC18.09■□□□□ 0.49
Trav13d-1A0A075B606 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Trav13d-1A0A075B606 Gm24970-201ENSMUST00000175582 82 ntBASIC18.09■□□□□ 0.49
Trav13d-1A0A075B606 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav13d-1A0A075B606 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav13d-1A0A075B606 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav13d-1A0A075B606 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13d-1A0A075B606 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13d-1A0A075B606 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trav13d-1A0A075B606 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-1A0A075B606 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trav13d-1A0A075B606 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13d-1A0A075B606 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav13d-1A0A075B606 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13d-1A0A075B606 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.04■□□□□ 0.48
Trav13d-1A0A075B606 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13d-1A0A075B606 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13d-1A0A075B606 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13d-1A0A075B606 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13d-1A0A075B606 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13d-1A0A075B606 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13d-1A0A075B606 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav13d-1A0A075B606 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.99■□□□□ 0.47
Trav13d-1A0A075B606 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13d-1A0A075B606 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Trav13d-1A0A075B606 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav13d-1A0A075B606 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms