Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ap4s1Q9WVL1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ap4s1Q9WVL1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ap4s1Q9WVL1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.39■□□□□ 0.53
Ap4s1Q9WVL1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ap4s1Q9WVL1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.39■□□□□ 0.53
Ap4s1Q9WVL1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Gm45444-201ENSMUST00000211394 898 ntBASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ap4s1Q9WVL1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ap4s1Q9WVL1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ap4s1Q9WVL1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ap4s1Q9WVL1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ap4s1Q9WVL1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ap4s1Q9WVL1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ap4s1Q9WVL1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ap4s1Q9WVL1 AA386476-201ENSMUST00000098781 1665 ntBASIC18.37■□□□□ 0.53
Ap4s1Q9WVL1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ap4s1Q9WVL1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ap4s1Q9WVL1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ap4s1Q9WVL1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ap4s1Q9WVL1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ap4s1Q9WVL1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ap4s1Q9WVL1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ap4s1Q9WVL1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.33■□□□□ 0.53
Ap4s1Q9WVL1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ap4s1Q9WVL1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.33■□□□□ 0.52
Ap4s1Q9WVL1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ap4s1Q9WVL1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms