Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.46■□□□□ 0.87
Gtf3c6Q9D8P7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gtf3c6Q9D8P7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gtf3c6Q9D8P7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gtf3c6Q9D8P7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Gtf3c6Q9D8P7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.45■□□□□ 0.86
Gtf3c6Q9D8P7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Gtf3c6Q9D8P7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf3c6Q9D8P7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Gtf3c6Q9D8P7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf3c6Q9D8P7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Gtf3c6Q9D8P7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Gm45417-201ENSMUST00000209533 758 ntBASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.44■□□□□ 0.86
Gtf3c6Q9D8P7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf3c6Q9D8P7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Gtf3c6Q9D8P7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf3c6Q9D8P7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf3c6Q9D8P7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Gtf3c6Q9D8P7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf3c6Q9D8P7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf3c6Q9D8P7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.43■□□□□ 0.86
Gtf3c6Q9D8P7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Gtf3c6Q9D8P7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf3c6Q9D8P7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.42■□□□□ 0.86
Gtf3c6Q9D8P7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf3c6Q9D8P7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf3c6Q9D8P7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Gtf3c6Q9D8P7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf3c6Q9D8P7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Gtf3c6Q9D8P7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf3c6Q9D8P7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf3c6Q9D8P7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3c6Q9D8P7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3c6Q9D8P7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3c6Q9D8P7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3c6Q9D8P7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3c6Q9D8P7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Gtf3c6Q9D8P7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Gtf3c6Q9D8P7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3c6Q9D8P7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3c6Q9D8P7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.41■□□□□ 0.86
Gtf3c6Q9D8P7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3c6Q9D8P7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3c6Q9D8P7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3c6Q9D8P7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf3c6Q9D8P7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf3c6Q9D8P7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf3c6Q9D8P7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf3c6Q9D8P7 Gm27801-201ENSMUST00000184174 223 ntBASIC20.4■□□□□ 0.86
Gtf3c6Q9D8P7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf3c6Q9D8P7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf3c6Q9D8P7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.4■□□□□ 0.86
Gtf3c6Q9D8P7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf3c6Q9D8P7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf3c6Q9D8P7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf3c6Q9D8P7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf3c6Q9D8P7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf3c6Q9D8P7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gtf3c6Q9D8P7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Gtf3c6Q9D8P7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Gtf3c6Q9D8P7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Gtf3c6Q9D8P7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gtf3c6Q9D8P7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gtf3c6Q9D8P7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gtf3c6Q9D8P7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gtf3c6Q9D8P7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gtf3c6Q9D8P7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gtf3c6Q9D8P7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.38■□□□□ 0.85
Gtf3c6Q9D8P7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Gtf3c6Q9D8P7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Gtf3c6Q9D8P7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gtf3c6Q9D8P7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gtf3c6Q9D8P7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms