Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhac1Q91Y10 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhac1Q91Y10 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhac1Q91Y10 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhac1Q91Y10 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhac1Q91Y10 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.89■□□□□ 0.45
Pcdhac1Q91Y10 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.89■□□□□ 0.45
Pcdhac1Q91Y10 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhac1Q91Y10 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhac1Q91Y10 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhac1Q91Y10 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhac1Q91Y10 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Gm12821-201ENSMUST00000120022 600 ntBASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhac1Q91Y10 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhac1Q91Y10 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhac1Q91Y10 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhac1Q91Y10 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.84■□□□□ 0.45
Pcdhac1Q91Y10 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
Pcdhac1Q91Y10 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdhac1Q91Y10 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
Pcdhac1Q91Y10 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhac1Q91Y10 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhac1Q91Y10 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhac1Q91Y10 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhac1Q91Y10 AA386476-201ENSMUST00000098781 1665 ntBASIC17.83■□□□□ 0.45
Pcdhac1Q91Y10 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhac1Q91Y10 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhac1Q91Y10 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhac1Q91Y10 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhac1Q91Y10 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhac1Q91Y10 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.83■□□□□ 0.44
Pcdhac1Q91Y10 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhac1Q91Y10 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhac1Q91Y10 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhac1Q91Y10 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
Pcdhac1Q91Y10 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhac1Q91Y10 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdhac1Q91Y10 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhac1Q91Y10 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhac1Q91Y10 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhac1Q91Y10 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhac1Q91Y10 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhac1Q91Y10 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhac1Q91Y10 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms