Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cspg4Q8VHY0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Gm43799-201ENSMUST00000201845 579 ntBASIC16.61■□□□□ 0.25
Cspg4Q8VHY0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cspg4Q8VHY0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg4Q8VHY0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cspg4Q8VHY0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Cspg4Q8VHY0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cspg4Q8VHY0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Cspg4Q8VHY0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg4Q8VHY0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cspg4Q8VHY0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg4Q8VHY0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg4Q8VHY0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg4Q8VHY0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg4Q8VHY0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg4Q8VHY0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cspg4Q8VHY0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg4Q8VHY0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg4Q8VHY0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cspg4Q8VHY0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms