Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ndc1Q8VCB1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ndc1Q8VCB1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ndc1Q8VCB1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ndc1Q8VCB1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ndc1Q8VCB1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ndc1Q8VCB1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ndc1Q8VCB1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ndc1Q8VCB1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ndc1Q8VCB1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ndc1Q8VCB1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.1■□□□□ 0.49
Ndc1Q8VCB1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.09■□□□□ 0.49
Ndc1Q8VCB1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Ndc1Q8VCB1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ndc1Q8VCB1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.08■□□□□ 0.48
Ndc1Q8VCB1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.08■□□□□ 0.48
Ndc1Q8VCB1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.08■□□□□ 0.48
Ndc1Q8VCB1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.08■□□□□ 0.48
Ndc1Q8VCB1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ndc1Q8VCB1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ndc1Q8VCB1 Golph3-202ENSMUST00000226517 2359 ntBASIC18.08■□□□□ 0.48
Ndc1Q8VCB1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Ndc1Q8VCB1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndc1Q8VCB1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Ndc1Q8VCB1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndc1Q8VCB1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ndc1Q8VCB1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndc1Q8VCB1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ndc1Q8VCB1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.07■□□□□ 0.48
Ndc1Q8VCB1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndc1Q8VCB1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndc1Q8VCB1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ndc1Q8VCB1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ndc1Q8VCB1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ndc1Q8VCB1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.06■□□□□ 0.48
Ndc1Q8VCB1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ndc1Q8VCB1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ndc1Q8VCB1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ndc1Q8VCB1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ndc1Q8VCB1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ndc1Q8VCB1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ndc1Q8VCB1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Ndc1Q8VCB1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ndc1Q8VCB1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 AA386476-201ENSMUST00000098781 1665 ntBASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ndc1Q8VCB1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndc1Q8VCB1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndc1Q8VCB1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndc1Q8VCB1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndc1Q8VCB1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndc1Q8VCB1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.03■□□□□ 0.48
Ndc1Q8VCB1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ndc1Q8VCB1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndc1Q8VCB1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndc1Q8VCB1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms