Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp40Q8R1F9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpp40Q8R1F9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpp40Q8R1F9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpp40Q8R1F9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rpp40Q8R1F9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpp40Q8R1F9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.64■□□□□ 0.89
Rpp40Q8R1F9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpp40Q8R1F9 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.64■□□□□ 0.89
Rpp40Q8R1F9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpp40Q8R1F9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.64■□□□□ 0.89
Rpp40Q8R1F9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpp40Q8R1F9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpp40Q8R1F9 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.63■□□□□ 0.89
Rpp40Q8R1F9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp40Q8R1F9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.63■□□□□ 0.89
Rpp40Q8R1F9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.63■□□□□ 0.89
Rpp40Q8R1F9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp40Q8R1F9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rpp40Q8R1F9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.63■□□□□ 0.89
Rpp40Q8R1F9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp40Q8R1F9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp40Q8R1F9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.62■□□□□ 0.89
Rpp40Q8R1F9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.62■□□□□ 0.89
Rpp40Q8R1F9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpp40Q8R1F9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpp40Q8R1F9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpp40Q8R1F9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpp40Q8R1F9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpp40Q8R1F9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Rpp40Q8R1F9 Gm13146-201ENSMUST00000118508 780 ntBASIC20.61■□□□□ 0.89
Rpp40Q8R1F9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpp40Q8R1F9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpp40Q8R1F9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rpp40Q8R1F9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpp40Q8R1F9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpp40Q8R1F9 Gm27405-201ENSMUST00000184201 112 ntBASIC20.6■□□□□ 0.89
Rpp40Q8R1F9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpp40Q8R1F9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rpp40Q8R1F9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpp40Q8R1F9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpp40Q8R1F9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rpp40Q8R1F9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpp40Q8R1F9 Gm7291-201ENSMUST00000199147 382 ntBASIC20.59■□□□□ 0.89
Rpp40Q8R1F9 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.59■□□□□ 0.89
Rpp40Q8R1F9 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.59■□□□□ 0.89
Rpp40Q8R1F9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rpp40Q8R1F9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpp40Q8R1F9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpp40Q8R1F9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpp40Q8R1F9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rpp40Q8R1F9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.58■□□□□ 0.89
Rpp40Q8R1F9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Rpp40Q8R1F9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rpp40Q8R1F9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpp40Q8R1F9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpp40Q8R1F9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rpp40Q8R1F9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rpp40Q8R1F9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Rpp40Q8R1F9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.58■□□□□ 0.89
Rpp40Q8R1F9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpp40Q8R1F9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpp40Q8R1F9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rpp40Q8R1F9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rpp40Q8R1F9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpp40Q8R1F9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rpp40Q8R1F9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpp40Q8R1F9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpp40Q8R1F9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rpp40Q8R1F9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rpp40Q8R1F9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Rpp40Q8R1F9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rpp40Q8R1F9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpp40Q8R1F9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rpp40Q8R1F9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Rpp40Q8R1F9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms