Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tsen54Q8C2A2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.02■□□□□ 0.16
Tsen54Q8C2A2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tsen54Q8C2A2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tsen54Q8C2A2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.02■□□□□ 0.15
Tsen54Q8C2A2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Tsen54Q8C2A2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tsen54Q8C2A2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tsen54Q8C2A2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tsen54Q8C2A2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tsen54Q8C2A2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tsen54Q8C2A2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tsen54Q8C2A2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tsen54Q8C2A2 Gm14117-201ENSMUST00000122417 843 ntBASIC16.01■□□□□ 0.15
Tsen54Q8C2A2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Tsen54Q8C2A2 Gm7417-201ENSMUST00000192950 473 ntBASIC16.01■□□□□ 0.15
Tsen54Q8C2A2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.01■□□□□ 0.15
Tsen54Q8C2A2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.01■□□□□ 0.15
Tsen54Q8C2A2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tsen54Q8C2A2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tsen54Q8C2A2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tsen54Q8C2A2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tsen54Q8C2A2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tsen54Q8C2A2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tsen54Q8C2A2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16■□□□□ 0.15
Tsen54Q8C2A2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Tsen54Q8C2A2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tsen54Q8C2A2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tsen54Q8C2A2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tsen54Q8C2A2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tsen54Q8C2A2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tsen54Q8C2A2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tsen54Q8C2A2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tsen54Q8C2A2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tsen54Q8C2A2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Tsen54Q8C2A2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tsen54Q8C2A2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tsen54Q8C2A2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tsen54Q8C2A2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tsen54Q8C2A2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tsen54Q8C2A2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tsen54Q8C2A2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tsen54Q8C2A2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tsen54Q8C2A2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Tsen54Q8C2A2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tsen54Q8C2A2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tsen54Q8C2A2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tsen54Q8C2A2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tsen54Q8C2A2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tsen54Q8C2A2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tsen54Q8C2A2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tsen54Q8C2A2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tsen54Q8C2A2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tsen54Q8C2A2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Tsen54Q8C2A2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tsen54Q8C2A2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tsen54Q8C2A2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tsen54Q8C2A2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Tsen54Q8C2A2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.96■□□□□ 0.15
Tsen54Q8C2A2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.96■□□□□ 0.15
Tsen54Q8C2A2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tsen54Q8C2A2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tsen54Q8C2A2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tsen54Q8C2A2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tsen54Q8C2A2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms