Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trub1Q8C0D0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trub1Q8C0D0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trub1Q8C0D0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trub1Q8C0D0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trub1Q8C0D0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Trub1Q8C0D0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Trub1Q8C0D0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trub1Q8C0D0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.82■□□□□ 0.76
Trub1Q8C0D0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.82■□□□□ 0.76
Trub1Q8C0D0 Gm40848-201ENSMUST00000221998 324 ntBASIC19.82■□□□□ 0.76
Trub1Q8C0D0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trub1Q8C0D0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Trub1Q8C0D0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trub1Q8C0D0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trub1Q8C0D0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trub1Q8C0D0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trub1Q8C0D0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trub1Q8C0D0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trub1Q8C0D0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.81■□□□□ 0.76
Trub1Q8C0D0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trub1Q8C0D0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trub1Q8C0D0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trub1Q8C0D0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trub1Q8C0D0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trub1Q8C0D0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trub1Q8C0D0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trub1Q8C0D0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trub1Q8C0D0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trub1Q8C0D0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trub1Q8C0D0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trub1Q8C0D0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trub1Q8C0D0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trub1Q8C0D0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.8■□□□□ 0.76
Trub1Q8C0D0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trub1Q8C0D0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trub1Q8C0D0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Gm27801-201ENSMUST00000184174 223 ntBASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Trub1Q8C0D0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trub1Q8C0D0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trub1Q8C0D0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Trub1Q8C0D0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trub1Q8C0D0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trub1Q8C0D0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.77■□□□□ 0.76
Trub1Q8C0D0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Trub1Q8C0D0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.77■□□□□ 0.76
Trub1Q8C0D0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trub1Q8C0D0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trub1Q8C0D0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Trub1Q8C0D0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trub1Q8C0D0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trub1Q8C0D0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.76■□□□□ 0.75
Trub1Q8C0D0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms