Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf18Q8BM39 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf18Q8BM39 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf18Q8BM39 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf18Q8BM39 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf18Q8BM39 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf18Q8BM39 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf18Q8BM39 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf18Q8BM39 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf18Q8BM39 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf18Q8BM39 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf18Q8BM39 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf18Q8BM39 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf18Q8BM39 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf18Q8BM39 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf18Q8BM39 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.19■□□□□ 0.5
Prpf18Q8BM39 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Prpf18Q8BM39 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf18Q8BM39 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf18Q8BM39 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf18Q8BM39 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf18Q8BM39 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf18Q8BM39 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf18Q8BM39 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf18Q8BM39 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf18Q8BM39 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Rps24-207ENSMUST00000224568 714 ntBASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.18■□□□□ 0.5
Prpf18Q8BM39 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf18Q8BM39 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.17■□□□□ 0.5
Prpf18Q8BM39 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf18Q8BM39 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf18Q8BM39 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf18Q8BM39 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf18Q8BM39 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.17■□□□□ 0.5
Prpf18Q8BM39 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.17■□□□□ 0.5
Prpf18Q8BM39 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Prpf18Q8BM39 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf18Q8BM39 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf18Q8BM39 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf18Q8BM39 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Gm9870-201ENSMUST00000063874 645 ntBASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf18Q8BM39 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Gm14117-201ENSMUST00000122417 843 ntBASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Prpf18Q8BM39 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.14■□□□□ 0.49
Prpf18Q8BM39 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Prpf18Q8BM39 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf18Q8BM39 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Prpf18Q8BM39 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.14■□□□□ 0.49
Prpf18Q8BM39 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.14■□□□□ 0.49
Prpf18Q8BM39 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf18Q8BM39 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf18Q8BM39 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf18Q8BM39 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf18Q8BM39 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf18Q8BM39 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf18Q8BM39 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms