Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc116Q80X53 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc116Q80X53 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc116Q80X53 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc116Q80X53 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc116Q80X53 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc116Q80X53 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc116Q80X53 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc116Q80X53 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc116Q80X53 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Mir7075-201ENSMUST00000184187 82 ntBASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc116Q80X53 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Gm43173-201ENSMUST00000202246 593 ntBASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc116Q80X53 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ccdc116Q80X53 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc116Q80X53 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc116Q80X53 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc116Q80X53 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc116Q80X53 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc116Q80X53 Gm27454-201ENSMUST00000185090 204 ntBASIC18.78■□□□□ 0.6
Ccdc116Q80X53 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc116Q80X53 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc116Q80X53 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc116Q80X53 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc116Q80X53 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc116Q80X53 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc116Q80X53 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc116Q80X53 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc116Q80X53 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc116Q80X53 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc116Q80X53 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.77■□□□□ 0.6
Ccdc116Q80X53 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc116Q80X53 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc116Q80X53 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc116Q80X53 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc116Q80X53 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc116Q80X53 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Smad6-203ENSMUST00000179458 273 ntBASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.76■□□□□ 0.59
Ccdc116Q80X53 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc116Q80X53 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc116Q80X53 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc116Q80X53 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc116Q80X53 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.75■□□□□ 0.59
Ccdc116Q80X53 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc116Q80X53 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc116Q80X53 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccdc116Q80X53 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ccdc116Q80X53 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.75■□□□□ 0.59
Ccdc116Q80X53 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc116Q80X53 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc116Q80X53 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc116Q80X53 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc116Q80X53 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms