Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-4Q5R1H9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.64□□□□□ -0.07
Trav7d-4Q5R1H9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-4Q5R1H9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Trav7d-4Q5R1H9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms