Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8d-2Q5R1B6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trav8d-2Q5R1B6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8d-2Q5R1B6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8d-2Q5R1B6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8d-2Q5R1B6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8d-2Q5R1B6 Gm715-201ENSMUST00000117865 831 ntBASIC18.84■□□□□ 0.61
Trav8d-2Q5R1B6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8d-2Q5R1B6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav8d-2Q5R1B6 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.84■□□□□ 0.61
Trav8d-2Q5R1B6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8d-2Q5R1B6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8d-2Q5R1B6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8d-2Q5R1B6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8d-2Q5R1B6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.83■□□□□ 0.61
Trav8d-2Q5R1B6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav8d-2Q5R1B6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav8d-2Q5R1B6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.83■□□□□ 0.6
Trav8d-2Q5R1B6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav8d-2Q5R1B6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav8d-2Q5R1B6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav8d-2Q5R1B6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav8d-2Q5R1B6 Dio3-201ENSMUST00000097228 1449 ntBASIC18.83■□□□□ 0.6
Trav8d-2Q5R1B6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8d-2Q5R1B6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trav8d-2Q5R1B6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trav8d-2Q5R1B6 Gm18666-201ENSMUST00000190039 958 ntBASIC18.82■□□□□ 0.6
Trav8d-2Q5R1B6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.82■□□□□ 0.6
Trav8d-2Q5R1B6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trav8d-2Q5R1B6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.82■□□□□ 0.6
Trav8d-2Q5R1B6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8d-2Q5R1B6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trav8d-2Q5R1B6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8d-2Q5R1B6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8d-2Q5R1B6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav8d-2Q5R1B6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Trav8d-2Q5R1B6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trav8d-2Q5R1B6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav8d-2Q5R1B6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav8d-2Q5R1B6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.81■□□□□ 0.6
Trav8d-2Q5R1B6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav8d-2Q5R1B6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trav8d-2Q5R1B6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav8d-2Q5R1B6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav8d-2Q5R1B6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav8d-2Q5R1B6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav8d-2Q5R1B6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trav8d-2Q5R1B6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trav8d-2Q5R1B6 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.8■□□□□ 0.6
Trav8d-2Q5R1B6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav8d-2Q5R1B6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav8d-2Q5R1B6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav8d-2Q5R1B6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav8d-2Q5R1B6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.8■□□□□ 0.6
Trav8d-2Q5R1B6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav8d-2Q5R1B6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8d-2Q5R1B6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8d-2Q5R1B6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8d-2Q5R1B6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8d-2Q5R1B6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trav8d-2Q5R1B6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8d-2Q5R1B6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.79■□□□□ 0.6
Trav8d-2Q5R1B6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8d-2Q5R1B6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.79■□□□□ 0.6
Trav8d-2Q5R1B6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8d-2Q5R1B6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8d-2Q5R1B6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8d-2Q5R1B6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav8d-2Q5R1B6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav8d-2Q5R1B6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trav8d-2Q5R1B6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav8d-2Q5R1B6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav8d-2Q5R1B6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav8d-2Q5R1B6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.77■□□□□ 0.6
Trav8d-2Q5R1B6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav8d-2Q5R1B6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav8d-2Q5R1B6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Trav8d-2Q5R1B6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trav8d-2Q5R1B6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav8d-2Q5R1B6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trav8d-2Q5R1B6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8d-2Q5R1B6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8d-2Q5R1B6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8d-2Q5R1B6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8d-2Q5R1B6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8d-2Q5R1B6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms