Protein–RNA interactions for Protein: Q3V009

Tmed1, Transmembrane emp24 domain-containing protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed1Q3V009 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmed1Q3V009 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmed1Q3V009 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmed1Q3V009 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmed1Q3V009 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tmed1Q3V009 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmed1Q3V009 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Gm43530-201ENSMUST00000195920 274 ntBASIC18.81■□□□□ 0.6
Tmed1Q3V009 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmed1Q3V009 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.8■□□□□ 0.6
Tmed1Q3V009 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmed1Q3V009 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Tmed1Q3V009 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmed1Q3V009 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tmed1Q3V009 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmed1Q3V009 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmed1Q3V009 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tmed1Q3V009 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmed1Q3V009 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmed1Q3V009 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmed1Q3V009 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmed1Q3V009 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmed1Q3V009 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmed1Q3V009 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmed1Q3V009 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Tmed1Q3V009 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tmed1Q3V009 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmed1Q3V009 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tmed1Q3V009 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmed1Q3V009 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmed1Q3V009 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmed1Q3V009 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tmed1Q3V009 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmed1Q3V009 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmed1Q3V009 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmed1Q3V009 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmed1Q3V009 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.77■□□□□ 0.6
Tmed1Q3V009 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmed1Q3V009 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmed1Q3V009 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.77■□□□□ 0.6
Tmed1Q3V009 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.77■□□□□ 0.6
Tmed1Q3V009 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.77■□□□□ 0.6
Tmed1Q3V009 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tmed1Q3V009 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tmed1Q3V009 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Tmed1Q3V009 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tmed1Q3V009 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmed1Q3V009 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmed1Q3V009 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmed1Q3V009 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmed1Q3V009 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tmed1Q3V009 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmed1Q3V009 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmed1Q3V009 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmed1Q3V009 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tmed1Q3V009 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmed1Q3V009 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tmed1Q3V009 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmed1Q3V009 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmed1Q3V009 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmed1Q3V009 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmed1Q3V009 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmed1Q3V009 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmed1Q3V009 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.75■□□□□ 0.59
Tmed1Q3V009 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tmed1Q3V009 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmed1Q3V009 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tmed1Q3V009 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Tmed1Q3V009 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmed1Q3V009 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Tmed1Q3V009 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms