Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msx3P70354 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.72■□□□□ 0.75
Msx3P70354 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.72■□□□□ 0.75
Msx3P70354 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msx3P70354 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msx3P70354 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Msx3P70354 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msx3P70354 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msx3P70354 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msx3P70354 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msx3P70354 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.71■□□□□ 0.75
Msx3P70354 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msx3P70354 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msx3P70354 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msx3P70354 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Msx3P70354 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msx3P70354 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msx3P70354 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msx3P70354 Gm11421-201ENSMUST00000122124 294 ntBASIC19.71■□□□□ 0.75
Msx3P70354 Gm8493-201ENSMUST00000196881 489 ntBASIC19.71■□□□□ 0.75
Msx3P70354 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.71■□□□□ 0.75
Msx3P70354 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msx3P70354 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Msx3P70354 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msx3P70354 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msx3P70354 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Msx3P70354 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Msx3P70354 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.7■□□□□ 0.74
Msx3P70354 Gm43173-201ENSMUST00000202246 593 ntBASIC19.7■□□□□ 0.74
Msx3P70354 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msx3P70354 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msx3P70354 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.7■□□□□ 0.74
Msx3P70354 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msx3P70354 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msx3P70354 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Msx3P70354 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.7■□□□□ 0.74
Msx3P70354 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msx3P70354 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Msx3P70354 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Msx3P70354 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msx3P70354 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msx3P70354 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Msx3P70354 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Msx3P70354 Gm27454-201ENSMUST00000185090 204 ntBASIC19.69■□□□□ 0.74
Msx3P70354 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.69■□□□□ 0.74
Msx3P70354 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.69■□□□□ 0.74
Msx3P70354 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Msx3P70354 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msx3P70354 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Msx3P70354 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msx3P70354 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msx3P70354 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msx3P70354 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.69■□□□□ 0.74
Msx3P70354 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msx3P70354 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Msx3P70354 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Msx3P70354 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msx3P70354 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msx3P70354 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.68■□□□□ 0.74
Msx3P70354 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msx3P70354 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msx3P70354 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msx3P70354 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msx3P70354 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msx3P70354 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msx3P70354 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Msx3P70354 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.68■□□□□ 0.74
Msx3P70354 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Msx3P70354 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Msx3P70354 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msx3P70354 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msx3P70354 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Msx3P70354 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msx3P70354 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msx3P70354 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msx3P70354 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msx3P70354 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msx3P70354 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msx3P70354 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msx3P70354 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msx3P70354 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Msx3P70354 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msx3P70354 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msx3P70354 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Msx3P70354 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msx3P70354 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Msx3P70354 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.66■□□□□ 0.74
Msx3P70354 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Msx3P70354 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msx3P70354 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msx3P70354 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Msx3P70354 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msx3P70354 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Msx3P70354 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msx3P70354 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Msx3P70354 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msx3P70354 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msx3P70354 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Msx3P70354 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.65■□□□□ 0.74
Msx3P70354 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms