Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
Tpm1P58771 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tpm1P58771 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tpm1P58771 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tpm1P58771 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tpm1P58771 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tpm1P58771 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tpm1P58771 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Tpm1P58771 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.37■■□□□ 1.01
Tpm1P58771 Gm9870-201ENSMUST00000063874 645 ntBASIC21.37■■□□□ 1.01
Tpm1P58771 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tpm1P58771 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.37■■□□□ 1.01
Tpm1P58771 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Tpm1P58771 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tpm1P58771 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
Tpm1P58771 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Tpm1P58771 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Tpm1P58771 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Tpm1P58771 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Tpm1P58771 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tpm1P58771 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Tpm1P58771 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.36■■□□□ 1.01
Tpm1P58771 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tpm1P58771 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tpm1P58771 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tpm1P58771 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.36■■□□□ 1.01
Tpm1P58771 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.36■■□□□ 1.01
Tpm1P58771 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Tpm1P58771 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Tpm1P58771 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tpm1P58771 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.36■■□□□ 1.01
Tpm1P58771 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tpm1P58771 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.35■■□□□ 1.01
Tpm1P58771 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tpm1P58771 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tpm1P58771 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.35■■□□□ 1.01
Tpm1P58771 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tpm1P58771 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tpm1P58771 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.35■■□□□ 1.01
Tpm1P58771 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Tpm1P58771 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tpm1P58771 Rarb-207ENSMUST00000225921 2756 ntBASIC21.35■■□□□ 1.01
Tpm1P58771 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tpm1P58771 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tpm1P58771 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Tpm1P58771 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tpm1P58771 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.34■■□□□ 1.01
Tpm1P58771 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tpm1P58771 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Tpm1P58771 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tpm1P58771 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tpm1P58771 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Tpm1P58771 Etf1-202ENSMUST00000180351 108 ntBASIC21.34■■□□□ 1.01
Tpm1P58771 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tpm1P58771 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Tpm1P58771 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tpm1P58771 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.34■■□□□ 1.01
Tpm1P58771 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Tpm1P58771 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Tpm1P58771 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Tpm1P58771 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tpm1P58771 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tpm1P58771 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Tpm1P58771 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tpm1P58771 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tpm1P58771 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tpm1P58771 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.33■■□□□ 1.01
Tpm1P58771 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tpm1P58771 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.33■■□□□ 1
Tpm1P58771 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tpm1P58771 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.33■■□□□ 1
Tpm1P58771 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tpm1P58771 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Tpm1P58771 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tpm1P58771 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.32■■□□□ 1
Tpm1P58771 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.32■■□□□ 1
Tpm1P58771 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tpm1P58771 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.32■■□□□ 1
Tpm1P58771 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tpm1P58771 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Tpm1P58771 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.31■■□□□ 1
Tpm1P58771 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tpm1P58771 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.31■■□□□ 1
Tpm1P58771 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tpm1P58771 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tpm1P58771 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tpm1P58771 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Tpm1P58771 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.31■■□□□ 1
Tpm1P58771 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tpm1P58771 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Tpm1P58771 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tpm1P58771 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tpm1P58771 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tpm1P58771 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tpm1P58771 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tpm1P58771 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tpm1P58771 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.3■■□□□ 1
Tpm1P58771 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tpm1P58771 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tpm1P58771 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms