Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx3P50481 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.57■□□□□ 0.72
Lhx3P50481 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx3P50481 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Lhx3P50481 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Lhx3P50481 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx3P50481 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx3P50481 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx3P50481 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx3P50481 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx3P50481 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx3P50481 Gm42569-201ENSMUST00000200539 472 ntBASIC19.56■□□□□ 0.72
Lhx3P50481 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx3P50481 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx3P50481 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx3P50481 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx3P50481 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx3P50481 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx3P50481 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx3P50481 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx3P50481 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx3P50481 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx3P50481 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx3P50481 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.55■□□□□ 0.72
Lhx3P50481 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx3P50481 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx3P50481 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx3P50481 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.55■□□□□ 0.72
Lhx3P50481 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Lhx3P50481 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx3P50481 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx3P50481 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.54■□□□□ 0.72
Lhx3P50481 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Lhx3P50481 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx3P50481 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx3P50481 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx3P50481 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx3P50481 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx3P50481 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Lhx3P50481 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx3P50481 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx3P50481 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx3P50481 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Lhx3P50481 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx3P50481 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx3P50481 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx3P50481 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx3P50481 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Lhx3P50481 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx3P50481 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx3P50481 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.53■□□□□ 0.72
Lhx3P50481 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx3P50481 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx3P50481 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Lhx3P50481 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.53■□□□□ 0.72
Lhx3P50481 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx3P50481 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Lhx3P50481 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx3P50481 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.52■□□□□ 0.72
Lhx3P50481 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx3P50481 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx3P50481 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Lhx3P50481 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx3P50481 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Lhx3P50481 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx3P50481 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Lhx3P50481 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.52■□□□□ 0.71
Lhx3P50481 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lhx3P50481 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx3P50481 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx3P50481 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx3P50481 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Lhx3P50481 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx3P50481 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx3P50481 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.51■□□□□ 0.71
Lhx3P50481 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx3P50481 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx3P50481 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx3P50481 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx3P50481 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Lhx3P50481 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Lhx3P50481 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.5■□□□□ 0.71
Lhx3P50481 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx3P50481 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx3P50481 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx3P50481 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx3P50481 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx3P50481 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx3P50481 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx3P50481 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Lhx3P50481 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.49■□□□□ 0.71
Lhx3P50481 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.49■□□□□ 0.71
Lhx3P50481 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx3P50481 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx3P50481 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx3P50481 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx3P50481 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx3P50481 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx3P50481 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.48■□□□□ 0.71
Lhx3P50481 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms