Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.54■□□□□ 0.56
Hnf4aP49698 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Hnf4aP49698 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.54■□□□□ 0.56
Hnf4aP49698 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hnf4aP49698 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hnf4aP49698 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hnf4aP49698 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hnf4aP49698 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hnf4aP49698 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Hnf4aP49698 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hnf4aP49698 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hnf4aP49698 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hnf4aP49698 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hnf4aP49698 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.54■□□□□ 0.56
Hnf4aP49698 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hnf4aP49698 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hnf4aP49698 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hnf4aP49698 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hnf4aP49698 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Hnf4aP49698 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.53■□□□□ 0.56
Hnf4aP49698 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Hnf4aP49698 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hnf4aP49698 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hnf4aP49698 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hnf4aP49698 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hnf4aP49698 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hnf4aP49698 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hnf4aP49698 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hnf4aP49698 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Hnf4aP49698 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Hnf4aP49698 Gm8493-201ENSMUST00000196881 489 ntBASIC18.52■□□□□ 0.56
Hnf4aP49698 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hnf4aP49698 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hnf4aP49698 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hnf4aP49698 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hnf4aP49698 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hnf4aP49698 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hnf4aP49698 Smad6-203ENSMUST00000179458 273 ntBASIC18.51■□□□□ 0.55
Hnf4aP49698 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hnf4aP49698 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hnf4aP49698 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Hnf4aP49698 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hnf4aP49698 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hnf4aP49698 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hnf4aP49698 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hnf4aP49698 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hnf4aP49698 Gm43173-201ENSMUST00000202246 593 ntBASIC18.5■□□□□ 0.55
Hnf4aP49698 Gm45417-201ENSMUST00000209533 758 ntBASIC18.5■□□□□ 0.55
Hnf4aP49698 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.5■□□□□ 0.55
Hnf4aP49698 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hnf4aP49698 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hnf4aP49698 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hnf4aP49698 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hnf4aP49698 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hnf4aP49698 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hnf4aP49698 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Hnf4aP49698 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hnf4aP49698 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hnf4aP49698 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hnf4aP49698 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Hnf4aP49698 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hnf4aP49698 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hnf4aP49698 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hnf4aP49698 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hnf4aP49698 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hnf4aP49698 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hnf4aP49698 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hnf4aP49698 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hnf4aP49698 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Hnf4aP49698 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hnf4aP49698 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hnf4aP49698 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Hnf4aP49698 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hnf4aP49698 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.48■□□□□ 0.55
Hnf4aP49698 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Hnf4aP49698 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hnf4aP49698 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hnf4aP49698 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.48■□□□□ 0.55
Hnf4aP49698 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.47■□□□□ 0.55
Hnf4aP49698 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hnf4aP49698 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hnf4aP49698 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hnf4aP49698 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hnf4aP49698 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hnf4aP49698 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hnf4aP49698 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hnf4aP49698 Gm11421-201ENSMUST00000122124 294 ntBASIC18.47■□□□□ 0.55
Hnf4aP49698 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hnf4aP49698 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.47■□□□□ 0.55
Hnf4aP49698 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Hnf4aP49698 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.46■□□□□ 0.55
Hnf4aP49698 Gm6139-201ENSMUST00000079261 882 ntBASIC18.46■□□□□ 0.55
Hnf4aP49698 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms