Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Vps4bP46467 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4bP46467 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Vps4bP46467 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4bP46467 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Vps4bP46467 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Vps4bP46467 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.41■□□□□ 0.7
Vps4bP46467 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.41■□□□□ 0.7
Vps4bP46467 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.41■□□□□ 0.7
Vps4bP46467 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4bP46467 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4bP46467 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.41■□□□□ 0.7
Vps4bP46467 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4bP46467 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4bP46467 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Vps4bP46467 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4bP46467 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Vps4bP46467 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4bP46467 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4bP46467 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4bP46467 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4bP46467 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.4■□□□□ 0.7
Vps4bP46467 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4bP46467 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4bP46467 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4bP46467 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Vps4bP46467 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4bP46467 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4bP46467 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4bP46467 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4bP46467 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vps4bP46467 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vps4bP46467 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps4bP46467 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps4bP46467 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.39■□□□□ 0.69
Vps4bP46467 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps4bP46467 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps4bP46467 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps4bP46467 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vps4bP46467 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps4bP46467 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps4bP46467 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps4bP46467 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Vps4bP46467 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps4bP46467 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.38■□□□□ 0.69
Vps4bP46467 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps4bP46467 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps4bP46467 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Vps4bP46467 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4bP46467 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4bP46467 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4bP46467 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4bP46467 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4bP46467 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4bP46467 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4bP46467 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps4bP46467 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps4bP46467 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps4bP46467 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.36■□□□□ 0.69
Vps4bP46467 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps4bP46467 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4bP46467 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4bP46467 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4bP46467 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.35■□□□□ 0.69
Vps4bP46467 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4bP46467 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4bP46467 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.35■□□□□ 0.69
Vps4bP46467 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.35■□□□□ 0.69
Vps4bP46467 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4bP46467 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Vps4bP46467 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4bP46467 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.35■□□□□ 0.69
Vps4bP46467 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4bP46467 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vps4bP46467 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4bP46467 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4bP46467 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4bP46467 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4bP46467 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4bP46467 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4bP46467 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4bP46467 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.34■□□□□ 0.69
Vps4bP46467 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.34■□□□□ 0.69
Vps4bP46467 Spcs1-204ENSMUST00000226782 949 ntBASIC19.34■□□□□ 0.69
Vps4bP46467 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4bP46467 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4bP46467 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4bP46467 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps4bP46467 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Vps4bP46467 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Vps4bP46467 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Vps4bP46467 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps4bP46467 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps4bP46467 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps4bP46467 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps4bP46467 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Vps4bP46467 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.33■□□□□ 0.68
Vps4bP46467 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Vps4bP46467 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps4bP46467 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms