Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcl12P40224 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.94■□□□□ 0.78
Cxcl12P40224 Gm10698-201ENSMUST00000182663 604 ntBASIC19.94■□□□□ 0.78
Cxcl12P40224 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Cxcl12P40224 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcl12P40224 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcl12P40224 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcl12P40224 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcl12P40224 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcl12P40224 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Cxcl12P40224 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcl12P40224 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.94■□□□□ 0.78
Cxcl12P40224 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cxcl12P40224 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcl12P40224 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcl12P40224 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cxcl12P40224 Gm11249-201ENSMUST00000117071 859 ntBASIC19.93■□□□□ 0.78
Cxcl12P40224 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Cxcl12P40224 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcl12P40224 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Cxcl12P40224 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcl12P40224 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcl12P40224 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcl12P40224 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcl12P40224 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcl12P40224 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcl12P40224 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cxcl12P40224 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Cxcl12P40224 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcl12P40224 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cxcl12P40224 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcl12P40224 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.92■□□□□ 0.78
Cxcl12P40224 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcl12P40224 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcl12P40224 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcl12P40224 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcl12P40224 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcl12P40224 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcl12P40224 Mir1199-201ENSMUST00000117015 119 ntBASIC19.92■□□□□ 0.78
Cxcl12P40224 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.92■□□□□ 0.78
Cxcl12P40224 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cxcl12P40224 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.92■□□□□ 0.78
Cxcl12P40224 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.92■□□□□ 0.78
Cxcl12P40224 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.92■□□□□ 0.78
Cxcl12P40224 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.92■□□□□ 0.78
Cxcl12P40224 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcl12P40224 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcl12P40224 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.91■□□□□ 0.78
Cxcl12P40224 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcl12P40224 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcl12P40224 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcl12P40224 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcl12P40224 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.91■□□□□ 0.78
Cxcl12P40224 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcl12P40224 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcl12P40224 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cxcl12P40224 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcl12P40224 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcl12P40224 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcl12P40224 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cxcl12P40224 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcl12P40224 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcl12P40224 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Cxcl12P40224 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.9■□□□□ 0.78
Cxcl12P40224 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.9■□□□□ 0.78
Cxcl12P40224 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcl12P40224 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcl12P40224 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcl12P40224 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcl12P40224 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcl12P40224 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Cxcl12P40224 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cxcl12P40224 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl12P40224 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
Cxcl12P40224 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl12P40224 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl12P40224 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cxcl12P40224 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.89■□□□□ 0.77
Cxcl12P40224 Gm44549-201ENSMUST00000208351 577 ntBASIC19.89■□□□□ 0.77
Cxcl12P40224 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl12P40224 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl12P40224 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl12P40224 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.89■□□□□ 0.77
Cxcl12P40224 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl12P40224 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl12P40224 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcl12P40224 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcl12P40224 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcl12P40224 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcl12P40224 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cxcl12P40224 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Cxcl12P40224 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.88■□□□□ 0.77
Cxcl12P40224 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.88■□□□□ 0.77
Cxcl12P40224 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcl12P40224 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.88■□□□□ 0.77
Cxcl12P40224 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcl12P40224 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcl12P40224 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcl12P40224 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcl12P40224 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms