Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SNRPA1P09661 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SNRPA1P09661 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SNRPA1P09661 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
SNRPA1P09661 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
SNRPA1P09661 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27.84■■■□□ 2.05
SNRPA1P09661 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.84■■■□□ 2.05
SNRPA1P09661 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.84■■■□□ 2.05
SNRPA1P09661 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SNRPA1P09661 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
SNRPA1P09661 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SNRPA1P09661 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
SNRPA1P09661 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SNRPA1P09661 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SNRPA1P09661 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
SNRPA1P09661 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SNRPA1P09661 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.05
SNRPA1P09661 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SNRPA1P09661 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.04
SNRPA1P09661 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC27.83■■■□□ 2.04
SNRPA1P09661 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC27.83■■■□□ 2.04
SNRPA1P09661 KRT87P-202ENST00000534226 1464 ntBASIC27.83■■■□□ 2.04
SNRPA1P09661 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC27.82■■■□□ 2.04
SNRPA1P09661 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC27.82■■■□□ 2.04
SNRPA1P09661 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
SNRPA1P09661 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
SNRPA1P09661 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
SNRPA1P09661 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
SNRPA1P09661 KRT18P11-201ENST00000435214 1283 ntBASIC27.82■■■□□ 2.04
SNRPA1P09661 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SNRPA1P09661 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.82■■■□□ 2.04
SNRPA1P09661 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC27.81■■■□□ 2.04
SNRPA1P09661 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
SNRPA1P09661 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.81■■■□□ 2.04
SNRPA1P09661 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SNRPA1P09661 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SNRPA1P09661 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC27.81■■■□□ 2.04
SNRPA1P09661 AC026185.1-201ENST00000445748 174 ntBASIC27.81■■■□□ 2.04
SNRPA1P09661 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
SNRPA1P09661 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SNRPA1P09661 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SNRPA1P09661 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC27.81■■■□□ 2.04
SNRPA1P09661 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC27.8■■■□□ 2.04
SNRPA1P09661 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC27.8■■■□□ 2.04
SNRPA1P09661 HLA-L-209ENST00000420110 1011 ntBASIC27.8■■■□□ 2.04
SNRPA1P09661 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
SNRPA1P09661 SPI1-203ENST00000533030 661 ntTSL 2 BASIC27.8■■■□□ 2.04
SNRPA1P09661 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC27.8■■■□□ 2.04
SNRPA1P09661 AC104187.1-201ENST00000607510 612 ntBASIC27.8■■■□□ 2.04
SNRPA1P09661 AC055733.4-201ENST00000638462 1354 ntBASIC27.8■■■□□ 2.04
SNRPA1P09661 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC27.8■■■□□ 2.04
SNRPA1P09661 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC27.8■■■□□ 2.04
SNRPA1P09661 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
SNRPA1P09661 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SNRPA1P09661 DUSP8P5-201ENST00000422884 1815 ntBASIC27.79■■■□□ 2.04
SNRPA1P09661 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SNRPA1P09661 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SNRPA1P09661 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC27.79■■■□□ 2.04
SNRPA1P09661 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.79■■■□□ 2.04
SNRPA1P09661 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.79■■■□□ 2.04
SNRPA1P09661 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SNRPA1P09661 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
SNRPA1P09661 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SNRPA1P09661 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
SNRPA1P09661 AC011767.1-201ENST00000617410 1153 ntBASIC27.78■■■□□ 2.04
SNRPA1P09661 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNRPA1P09661 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC27.77■■■□□ 2.04
SNRPA1P09661 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.77■■■□□ 2.04
SNRPA1P09661 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SNRPA1P09661 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC27.77■■■□□ 2.04
SNRPA1P09661 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC27.77■■■□□ 2.04
SNRPA1P09661 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNRPA1P09661 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNRPA1P09661 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SNRPA1P09661 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
SNRPA1P09661 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNRPA1P09661 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
SNRPA1P09661 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.77■■■□□ 2.04
SNRPA1P09661 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC27.76■■■□□ 2.03
SNRPA1P09661 METTL26-203ENST00000397664 604 ntTSL 2 BASIC27.76■■■□□ 2.03
SNRPA1P09661 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SNRPA1P09661 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.76■■■□□ 2.03
SNRPA1P09661 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.76■■■□□ 2.03
SNRPA1P09661 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC27.76■■■□□ 2.03
SNRPA1P09661 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SNRPA1P09661 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SNRPA1P09661 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SNRPA1P09661 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SNRPA1P09661 MFF-207ENST00000409565 1548 ntTSL 2 BASIC27.75■■■□□ 2.03
SNRPA1P09661 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC27.75■■■□□ 2.03
SNRPA1P09661 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SNRPA1P09661 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SNRPA1P09661 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SNRPA1P09661 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SNRPA1P09661 CROCCP5-201ENST00000436658 830 ntBASIC27.74■■■□□ 2.03
SNRPA1P09661 PPP1R14BP3-201ENST00000509033 445 ntBASIC27.74■■■□□ 2.03
SNRPA1P09661 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC27.74■■■□□ 2.03
SNRPA1P09661 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC27.74■■■□□ 2.03
SNRPA1P09661 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC27.74■■■□□ 2.03
SNRPA1P09661 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms