Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
RETP07949 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.9■■□□□ 1.1
RETP07949 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.9■■□□□ 1.1
RETP07949 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
RETP07949 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RETP07949 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.9■■□□□ 1.1
RETP07949 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.9■■□□□ 1.1
RETP07949 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.9■■□□□ 1.1
RETP07949 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.9■■□□□ 1.1
RETP07949 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RETP07949 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RETP07949 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.89■■□□□ 1.1
RETP07949 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
RETP07949 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.89■■□□□ 1.09
RETP07949 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.89■■□□□ 1.09
RETP07949 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.89■■□□□ 1.09
RETP07949 MIR4651-201ENST00000582622 73 ntBASIC21.89■■□□□ 1.09
RETP07949 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RETP07949 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RETP07949 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RETP07949 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RETP07949 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETP07949 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETP07949 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETP07949 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.88■■□□□ 1.09
RETP07949 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETP07949 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETP07949 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RETP07949 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RETP07949 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETP07949 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETP07949 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.88■■□□□ 1.09
RETP07949 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.88■■□□□ 1.09
RETP07949 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.88■■□□□ 1.09
RETP07949 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
RETP07949 AL050303.2-201ENST00000619798 666 ntBASIC21.88■■□□□ 1.09
RETP07949 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETP07949 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RETP07949 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETP07949 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RETP07949 AC079834.2-201ENST00000609776 1949 ntBASIC21.88■■□□□ 1.09
RETP07949 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RETP07949 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETP07949 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RETP07949 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RETP07949 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETP07949 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETP07949 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.87■■□□□ 1.09
RETP07949 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RETP07949 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETP07949 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RETP07949 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETP07949 MFSD11-216ENST00000590393 1141 ntBASIC21.87■■□□□ 1.09
RETP07949 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.87■■□□□ 1.09
RETP07949 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.87■■□□□ 1.09
RETP07949 AC231657.2-201ENST00000624556 255 ntBASIC21.87■■□□□ 1.09
RETP07949 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RETP07949 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETP07949 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RETP07949 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETP07949 HLA-L-211ENST00000482052 1765 ntBASIC21.87■■□□□ 1.09
RETP07949 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.87■■□□□ 1.09
RETP07949 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RETP07949 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RETP07949 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RETP07949 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RETP07949 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RETP07949 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RETP07949 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RETP07949 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RETP07949 SLC29A4P1-201ENST00000398760 971 ntBASIC21.86■■□□□ 1.09
RETP07949 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RETP07949 SLC7A5P2-201ENST00000553010 536 ntBASIC21.86■■□□□ 1.09
RETP07949 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.86■■□□□ 1.09
RETP07949 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RETP07949 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RETP07949 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RETP07949 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RETP07949 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RETP07949 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.85■■□□□ 1.09
RETP07949 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RETP07949 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.85■■□□□ 1.09
RETP07949 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.85■■□□□ 1.09
RETP07949 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RETP07949 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
RETP07949 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.85■■□□□ 1.09
RETP07949 GUSBP6-202ENST00000438529 1198 ntBASIC21.85■■□□□ 1.09
RETP07949 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.85■■□□□ 1.09
RETP07949 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.85■■□□□ 1.09
RETP07949 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.85■■□□□ 1.09
RETP07949 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RETP07949 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RETP07949 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RETP07949 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RETP07949 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RETP07949 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RETP07949 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
RETP07949 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
RETP07949 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RETP07949 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms