Protein–RNA interactions for Protein: O70479

Tnfaip1, BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip1O70479 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfaip1O70479 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.38■□□□□ 0.85
Tnfaip1O70479 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfaip1O70479 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfaip1O70479 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfaip1O70479 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Tnfaip1O70479 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tnfaip1O70479 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tnfaip1O70479 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfaip1O70479 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfaip1O70479 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.37■□□□□ 0.85
Tnfaip1O70479 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.37■□□□□ 0.85
Tnfaip1O70479 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfaip1O70479 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfaip1O70479 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.36■□□□□ 0.85
Tnfaip1O70479 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfaip1O70479 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfaip1O70479 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Tnfaip1O70479 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfaip1O70479 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfaip1O70479 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Tnfaip1O70479 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.36■□□□□ 0.85
Tnfaip1O70479 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfaip1O70479 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Tnfaip1O70479 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfaip1O70479 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Tnfaip1O70479 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Tnfaip1O70479 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Tnfaip1O70479 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfaip1O70479 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfaip1O70479 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfaip1O70479 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Tnfaip1O70479 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.34■□□□□ 0.85
Tnfaip1O70479 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.34■□□□□ 0.85
Tnfaip1O70479 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfaip1O70479 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfaip1O70479 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfaip1O70479 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.34■□□□□ 0.85
Tnfaip1O70479 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfaip1O70479 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfaip1O70479 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfaip1O70479 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfaip1O70479 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Tnfaip1O70479 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfaip1O70479 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.33■□□□□ 0.85
Tnfaip1O70479 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
Tnfaip1O70479 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.33■□□□□ 0.85
Tnfaip1O70479 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.33■□□□□ 0.85
Tnfaip1O70479 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.33■□□□□ 0.85
Tnfaip1O70479 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfaip1O70479 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Tnfaip1O70479 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfaip1O70479 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnfaip1O70479 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.33■□□□□ 0.84
Tnfaip1O70479 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnfaip1O70479 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.33■□□□□ 0.84
Tnfaip1O70479 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tnfaip1O70479 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Tnfaip1O70479 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Tnfaip1O70479 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfaip1O70479 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.32■□□□□ 0.84
Tnfaip1O70479 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Tnfaip1O70479 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Tnfaip1O70479 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Tnfaip1O70479 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfaip1O70479 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfaip1O70479 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.31■□□□□ 0.84
Tnfaip1O70479 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfaip1O70479 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfaip1O70479 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfaip1O70479 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Tnfaip1O70479 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfaip1O70479 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Tnfaip1O70479 Gm12896-201ENSMUST00000118430 226 ntBASIC20.3■□□□□ 0.84
Tnfaip1O70479 Gm27275-201ENSMUST00000184318 272 ntBASIC20.3■□□□□ 0.84
Tnfaip1O70479 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfaip1O70479 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfaip1O70479 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfaip1O70479 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfaip1O70479 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfaip1O70479 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.3■□□□□ 0.84
Tnfaip1O70479 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.3■□□□□ 0.84
Tnfaip1O70479 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Tnfaip1O70479 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Tnfaip1O70479 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tnfaip1O70479 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tnfaip1O70479 Mir6982-201ENSMUST00000184354 68 ntBASIC20.29■□□□□ 0.84
Tnfaip1O70479 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.29■□□□□ 0.84
Tnfaip1O70479 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.29■□□□□ 0.84
Tnfaip1O70479 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Tnfaip1O70479 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfaip1O70479 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tnfaip1O70479 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfaip1O70479 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Tnfaip1O70479 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfaip1O70479 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfaip1O70479 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfaip1O70479 Gm22325-201ENSMUST00000158904 308 ntBASIC20.28■□□□□ 0.84
Tnfaip1O70479 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.28■□□□□ 0.84
Tnfaip1O70479 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms