Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 Mir7075-201ENSMUST00000184187 82 ntBASIC20.49■□□□□ 0.87
Kcnu1O54982 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
Kcnu1O54982 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Kcnu1O54982 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kcnu1O54982 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kcnu1O54982 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.48■□□□□ 0.87
Kcnu1O54982 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Kcnu1O54982 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kcnu1O54982 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Kcnu1O54982 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kcnu1O54982 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kcnu1O54982 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Kcnu1O54982 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kcnu1O54982 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Kcnu1O54982 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kcnu1O54982 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Kcnu1O54982 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Kcnu1O54982 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kcnu1O54982 Gm43173-201ENSMUST00000202246 593 ntBASIC20.47■□□□□ 0.87
Kcnu1O54982 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kcnu1O54982 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Kcnu1O54982 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kcnu1O54982 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kcnu1O54982 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kcnu1O54982 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Gm27454-201ENSMUST00000185090 204 ntBASIC20.46■□□□□ 0.87
Kcnu1O54982 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Kcnu1O54982 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.46■□□□□ 0.87
Kcnu1O54982 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kcnu1O54982 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.46■□□□□ 0.87
Kcnu1O54982 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Kcnu1O54982 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Kcnu1O54982 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Kcnu1O54982 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.45■□□□□ 0.86
Kcnu1O54982 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.45■□□□□ 0.86
Kcnu1O54982 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Kcnu1O54982 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Kcnu1O54982 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Kcnu1O54982 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.45■□□□□ 0.86
Kcnu1O54982 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.45■□□□□ 0.86
Kcnu1O54982 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcnu1O54982 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcnu1O54982 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Kcnu1O54982 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcnu1O54982 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Kcnu1O54982 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcnu1O54982 Smad6-203ENSMUST00000179458 273 ntBASIC20.44■□□□□ 0.86
Kcnu1O54982 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Kcnu1O54982 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.44■□□□□ 0.86
Kcnu1O54982 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcnu1O54982 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcnu1O54982 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcnu1O54982 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Kcnu1O54982 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Kcnu1O54982 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Kcnu1O54982 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Kcnu1O54982 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.43■□□□□ 0.86
Kcnu1O54982 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Kcnu1O54982 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.43■□□□□ 0.86
Kcnu1O54982 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.43■□□□□ 0.86
Kcnu1O54982 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Kcnu1O54982 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Kcnu1O54982 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Kcnu1O54982 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Kcnu1O54982 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Kcnu1O54982 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Kcnu1O54982 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Kcnu1O54982 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Kcnu1O54982 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Kcnu1O54982 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Kcnu1O54982 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Kcnu1O54982 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Kcnu1O54982 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Kcnu1O54982 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Kcnu1O54982 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms