Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.27■□□□□ 0.36
Pcdh1F7BJK1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh1F7BJK1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh1F7BJK1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdh1F7BJK1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdh1F7BJK1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh1F7BJK1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh1F7BJK1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdh1F7BJK1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh1F7BJK1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Pcdh1F7BJK1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh1F7BJK1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh1F7BJK1 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.27■□□□□ 0.35
Pcdh1F7BJK1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdh1F7BJK1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh1F7BJK1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdh1F7BJK1 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.26■□□□□ 0.35
Pcdh1F7BJK1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdh1F7BJK1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh1F7BJK1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh1F7BJK1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh1F7BJK1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh1F7BJK1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh1F7BJK1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh1F7BJK1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh1F7BJK1 Rps24-207ENSMUST00000224568 714 ntBASIC17.25■□□□□ 0.35
Pcdh1F7BJK1 Gm9959-201ENSMUST00000068277 390 ntBASIC17.25■□□□□ 0.35
Pcdh1F7BJK1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh1F7BJK1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh1F7BJK1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdh1F7BJK1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh1F7BJK1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh1F7BJK1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdh1F7BJK1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh1F7BJK1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh1F7BJK1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Pcdh1F7BJK1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh1F7BJK1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh1F7BJK1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh1F7BJK1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh1F7BJK1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh1F7BJK1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh1F7BJK1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh1F7BJK1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Pcdh1F7BJK1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Pcdh1F7BJK1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh1F7BJK1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh1F7BJK1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh1F7BJK1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh1F7BJK1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdh1F7BJK1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh1F7BJK1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh1F7BJK1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh1F7BJK1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdh1F7BJK1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh1F7BJK1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh1F7BJK1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh1F7BJK1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh1F7BJK1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdh1F7BJK1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdh1F7BJK1 Gm45102-201ENSMUST00000207427 857 ntBASIC17.21■□□□□ 0.35
Pcdh1F7BJK1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh1F7BJK1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh1F7BJK1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh1F7BJK1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh1F7BJK1 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.2■□□□□ 0.34
Pcdh1F7BJK1 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.2■□□□□ 0.34
Pcdh1F7BJK1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdh1F7BJK1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdh1F7BJK1 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.2■□□□□ 0.34
Pcdh1F7BJK1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh1F7BJK1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdh1F7BJK1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh1F7BJK1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh1F7BJK1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh1F7BJK1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh1F7BJK1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh1F7BJK1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms