Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28305F6U473 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Gm28305F6U473 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28305F6U473 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28305F6U473 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28305F6U473 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.22□□□□□ -0.13
Gm28305F6U473 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28305F6U473 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Gm28305F6U473 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28305F6U473 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28305F6U473 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28305F6U473 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.22□□□□□ -0.13
Gm28305F6U473 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28305F6U473 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28305F6U473 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Gm28305F6U473 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28305F6U473 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28305F6U473 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28305F6U473 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28305F6U473 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Gm28305F6U473 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28305F6U473 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28305F6U473 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28305F6U473 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Gm28305F6U473 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm28305F6U473 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Gm28305F6U473 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm28305F6U473 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm28305F6U473 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm28305F6U473 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28305F6U473 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28305F6U473 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Gm28305F6U473 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28305F6U473 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm28305F6U473 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28305F6U473 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28305F6U473 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28305F6U473 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28305F6U473 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28305F6U473 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28305F6U473 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28305F6U473 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm28305F6U473 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28305F6U473 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gm28305F6U473 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Gm28305F6U473 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gm28305F6U473 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28305F6U473 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.19□□□□□ -0.14
Gm28305F6U473 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28305F6U473 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.19□□□□□ -0.14
Gm28305F6U473 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28305F6U473 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28305F6U473 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28305F6U473 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28305F6U473 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gm28305F6U473 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28305F6U473 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28305F6U473 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28305F6U473 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28305F6U473 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28305F6U473 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm28305F6U473 Gm45855-201ENSMUST00000212546 880 ntBASIC14.18□□□□□ -0.14
Gm28305F6U473 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28305F6U473 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28305F6U473 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28305F6U473 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28305F6U473 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28305F6U473 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28305F6U473 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28305F6U473 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28305F6U473 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm28305F6U473 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm28305F6U473 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC14.17□□□□□ -0.14
Gm28305F6U473 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gm28305F6U473 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm28305F6U473 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28305F6U473 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28305F6U473 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28305F6U473 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28305F6U473 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28305F6U473 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28305F6U473 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28305F6U473 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms