Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3n-3A0A0G2JEM0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Gm10399-202ENSMUST00000202768 748 ntBASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3n-3A0A0G2JEM0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.46□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms