Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv15A0A0A6YYE3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trbv15A0A0A6YYE3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.97■□□□□ 0.15
Trbv15A0A0A6YYE3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.97■□□□□ 0.15
Trbv15A0A0A6YYE3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.97■□□□□ 0.15
Trbv15A0A0A6YYE3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv15A0A0A6YYE3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv15A0A0A6YYE3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv15A0A0A6YYE3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Trbv15A0A0A6YYE3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trbv15A0A0A6YYE3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv15A0A0A6YYE3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv15A0A0A6YYE3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv15A0A0A6YYE3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv15A0A0A6YYE3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv15A0A0A6YYE3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trbv15A0A0A6YYE3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.96■□□□□ 0.15
Trbv15A0A0A6YYE3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.96■□□□□ 0.15
Trbv15A0A0A6YYE3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv15A0A0A6YYE3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv15A0A0A6YYE3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv15A0A0A6YYE3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv15A0A0A6YYE3 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.96■□□□□ 0.14
Trbv15A0A0A6YYE3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv15A0A0A6YYE3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv15A0A0A6YYE3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv15A0A0A6YYE3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv15A0A0A6YYE3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv15A0A0A6YYE3 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.95■□□□□ 0.14
Trbv15A0A0A6YYE3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv15A0A0A6YYE3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv15A0A0A6YYE3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv15A0A0A6YYE3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv15A0A0A6YYE3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv15A0A0A6YYE3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trbv15A0A0A6YYE3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv15A0A0A6YYE3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv15A0A0A6YYE3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.95■□□□□ 0.14
Trbv15A0A0A6YYE3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv15A0A0A6YYE3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv15A0A0A6YYE3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv15A0A0A6YYE3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv15A0A0A6YYE3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trbv15A0A0A6YYE3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv15A0A0A6YYE3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trbv15A0A0A6YYE3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.94■□□□□ 0.14
Trbv15A0A0A6YYE3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trbv15A0A0A6YYE3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv15A0A0A6YYE3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trbv15A0A0A6YYE3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv15A0A0A6YYE3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trbv15A0A0A6YYE3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv15A0A0A6YYE3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv15A0A0A6YYE3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv15A0A0A6YYE3 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.92■□□□□ 0.14
Trbv15A0A0A6YYE3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv15A0A0A6YYE3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv15A0A0A6YYE3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv15A0A0A6YYE3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trbv15A0A0A6YYE3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.92■□□□□ 0.14
Trbv15A0A0A6YYE3 Gm5921-201ENSMUST00000075898 882 ntBASIC15.92■□□□□ 0.14
Trbv15A0A0A6YYE3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv15A0A0A6YYE3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trbv15A0A0A6YYE3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv15A0A0A6YYE3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv15A0A0A6YYE3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv15A0A0A6YYE3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv15A0A0A6YYE3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.91■□□□□ 0.14
Trbv15A0A0A6YYE3 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.91■□□□□ 0.14
Trbv15A0A0A6YYE3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv15A0A0A6YYE3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv15A0A0A6YYE3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv15A0A0A6YYE3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv15A0A0A6YYE3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv15A0A0A6YYE3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv15A0A0A6YYE3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv15A0A0A6YYE3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv15A0A0A6YYE3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv15A0A0A6YYE3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trbv15A0A0A6YYE3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms