Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav13-4-dv7A0A075B6C2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-4-dv7A0A075B6C2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav13-4-dv7A0A075B6C2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-4-dv7A0A075B6C2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-4-dv7A0A075B6C2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-4-dv7A0A075B6C2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav13-4-dv7A0A075B6C2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-4-dv7A0A075B6C2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-4-dv7A0A075B6C2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-4-dv7A0A075B6C2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav13-4-dv7A0A075B6C2 Gm9870-201ENSMUST00000063874 645 ntBASIC13.21□□□□□ -0.29
Trav13-4-dv7A0A075B6C2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-4-dv7A0A075B6C2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Etf1-202ENSMUST00000180351 108 ntBASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Gm15820-201ENSMUST00000201566 728 ntBASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms