Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9d-1A0A075B699 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9d-1A0A075B699 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9d-1A0A075B699 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9d-1A0A075B699 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trav9d-1A0A075B699 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9d-1A0A075B699 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9d-1A0A075B699 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Trav9d-1A0A075B699 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-1A0A075B699 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-1A0A075B699 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-1A0A075B699 Golgb1-201ENSMUST00000023534 498 ntBASIC14.77□□□□□ -0.05
Trav9d-1A0A075B699 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-1A0A075B699 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-1A0A075B699 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-1A0A075B699 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-1A0A075B699 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-1A0A075B699 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-1A0A075B699 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-1A0A075B699 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav9d-1A0A075B699 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-1A0A075B699 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-1A0A075B699 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-1A0A075B699 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-1A0A075B699 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-1A0A075B699 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-1A0A075B699 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-1A0A075B699 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.73□□□□□ -0.05
Trav9d-1A0A075B699 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-1A0A075B699 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Trav9d-1A0A075B699 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav9d-1A0A075B699 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-1A0A075B699 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-1A0A075B699 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-1A0A075B699 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-1A0A075B699 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-1A0A075B699 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms