Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-4-dv10A0A075B651 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav4-4-dv10A0A075B651 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-4-dv10A0A075B651 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
Trav4-4-dv10A0A075B651 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-4-dv10A0A075B651 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.96□□□□□ -0.01
Trav4-4-dv10A0A075B651 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav4-4-dv10A0A075B651 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-4-dv10A0A075B651 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-4-dv10A0A075B651 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-4-dv10A0A075B651 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-4-dv10A0A075B651 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-4-dv10A0A075B651 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-4-dv10A0A075B651 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-4-dv10A0A075B651 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-4-dv10A0A075B651 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-4-dv10A0A075B651 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-4-dv10A0A075B651 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-4-dv10A0A075B651 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Trav4-4-dv10A0A075B651 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-4-dv10A0A075B651 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-4-dv10A0A075B651 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-4-dv10A0A075B651 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4-4-dv10A0A075B651 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4-4-dv10A0A075B651 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4-4-dv10A0A075B651 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4-4-dv10A0A075B651 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4-4-dv10A0A075B651 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav4-4-dv10A0A075B651 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav4-4-dv10A0A075B651 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav4-4-dv10A0A075B651 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4-4-dv10A0A075B651 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav4-4-dv10A0A075B651 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4-4-dv10A0A075B651 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4-4-dv10A0A075B651 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav4-4-dv10A0A075B651 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trav4-4-dv10A0A075B651 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4-4-dv10A0A075B651 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4-4-dv10A0A075B651 Gm15820-201ENSMUST00000201566 728 ntBASIC14.91□□□□□ -0.02
Trav4-4-dv10A0A075B651 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms