Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-7-dv9A0A075B639 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav6-7-dv9A0A075B639 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-7-dv9A0A075B639 Gm12251-201ENSMUST00000117893 792 ntBASIC17■□□□□ 0.31
Trav6-7-dv9A0A075B639 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-7-dv9A0A075B639 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav6-7-dv9A0A075B639 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-7-dv9A0A075B639 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-7-dv9A0A075B639 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-7-dv9A0A075B639 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Trav6-7-dv9A0A075B639 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-7-dv9A0A075B639 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-7-dv9A0A075B639 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-7-dv9A0A075B639 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-7-dv9A0A075B639 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Trav6-7-dv9A0A075B639 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav6-7-dv9A0A075B639 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.99■□□□□ 0.31
Trav6-7-dv9A0A075B639 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.99■□□□□ 0.31
Trav6-7-dv9A0A075B639 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.99■□□□□ 0.31
Trav6-7-dv9A0A075B639 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Trav6-7-dv9A0A075B639 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-7-dv9A0A075B639 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-7-dv9A0A075B639 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Mir7075-201ENSMUST00000184187 82 ntBASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-7-dv9A0A075B639 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-7-dv9A0A075B639 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav6-7-dv9A0A075B639 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-7-dv9A0A075B639 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-7-dv9A0A075B639 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-7-dv9A0A075B639 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-7-dv9A0A075B639 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-7-dv9A0A075B639 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-7-dv9A0A075B639 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-7-dv9A0A075B639 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Trav6-7-dv9A0A075B639 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.97■□□□□ 0.31
Trav6-7-dv9A0A075B639 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-7-dv9A0A075B639 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-7-dv9A0A075B639 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Gm11421-201ENSMUST00000122124 294 ntBASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-7-dv9A0A075B639 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav6-7-dv9A0A075B639 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-7-dv9A0A075B639 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms