Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRTM1Q9HBL6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRTM1Q9HBL6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRTM1Q9HBL6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
LRTM1Q9HBL6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.89■□□□□ 0.94
LRTM1Q9HBL6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRTM1Q9HBL6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRTM1Q9HBL6 AC006455.2-201ENST00000429931 906 ntBASIC20.89■□□□□ 0.93
LRTM1Q9HBL6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.89■□□□□ 0.93
LRTM1Q9HBL6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.89■□□□□ 0.93
LRTM1Q9HBL6 AL356740.2-201ENST00000601559 647 ntBASIC20.89■□□□□ 0.93
LRTM1Q9HBL6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRTM1Q9HBL6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.89■□□□□ 0.93
LRTM1Q9HBL6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRTM1Q9HBL6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LRTM1Q9HBL6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRTM1Q9HBL6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.89■□□□□ 0.93
LRTM1Q9HBL6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 AC133637.1-201ENST00000624115 1537 ntBASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 pRNA.6-201ENST00000610482 90 ntBASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 pRNA.5-201ENST00000612139 90 ntBASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 pRNA.11-201ENST00000618423 90 ntBASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 pRNA.13-201ENST00000619112 90 ntBASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 AC010542.4-201ENST00000563151 1910 ntBASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRTM1Q9HBL6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 GUSBP5-201ENST00000418136 578 ntBASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRTM1Q9HBL6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRTM1Q9HBL6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRTM1Q9HBL6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.86■□□□□ 0.93
LRTM1Q9HBL6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.86■□□□□ 0.93
LRTM1Q9HBL6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRTM1Q9HBL6 AC099791.2-201ENST00000605725 427 ntBASIC20.86■□□□□ 0.93
LRTM1Q9HBL6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRTM1Q9HBL6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
LRTM1Q9HBL6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRTM1Q9HBL6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LRTM1Q9HBL6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRTM1Q9HBL6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
LRTM1Q9HBL6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LRTM1Q9HBL6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LRTM1Q9HBL6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.85■□□□□ 0.93
LRTM1Q9HBL6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRTM1Q9HBL6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.85■□□□□ 0.93
LRTM1Q9HBL6 AL031602.1-201ENST00000633169 911 ntBASIC20.85■□□□□ 0.93
LRTM1Q9HBL6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRTM1Q9HBL6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 MIR3621-201ENST00000580529 85 ntBASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRTM1Q9HBL6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 FAM99A-202ENST00000538190 1989 ntBASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms