Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Gm2399-201ENSMUST00000104944 225 ntBASIC23.3■■□□□ 1.32
Rnaseh2aQ9CWY8 Gm6728-201ENSMUST00000178117 1065 ntBASIC23.3■■□□□ 1.32
Rnaseh2aQ9CWY8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnaseh2aQ9CWY8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnaseh2aQ9CWY8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnaseh2aQ9CWY8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnaseh2aQ9CWY8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
Rnaseh2aQ9CWY8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnaseh2aQ9CWY8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnaseh2aQ9CWY8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Rnaseh2aQ9CWY8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnaseh2aQ9CWY8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC23.29■■□□□ 1.32
Rnaseh2aQ9CWY8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.29■■□□□ 1.32
Rnaseh2aQ9CWY8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnaseh2aQ9CWY8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.28■■□□□ 1.32
Rnaseh2aQ9CWY8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.28■■□□□ 1.32
Rnaseh2aQ9CWY8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.28■■□□□ 1.32
Rnaseh2aQ9CWY8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnaseh2aQ9CWY8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
Rnaseh2aQ9CWY8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
Rnaseh2aQ9CWY8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rnaseh2aQ9CWY8 Gm44549-201ENSMUST00000208351 577 ntBASIC23.28■■□□□ 1.32
Rnaseh2aQ9CWY8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC23.28■■□□□ 1.32
Rnaseh2aQ9CWY8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rnaseh2aQ9CWY8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rnaseh2aQ9CWY8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnaseh2aQ9CWY8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnaseh2aQ9CWY8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnaseh2aQ9CWY8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC23.27■■□□□ 1.32
Rnaseh2aQ9CWY8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnaseh2aQ9CWY8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnaseh2aQ9CWY8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnaseh2aQ9CWY8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnaseh2aQ9CWY8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnaseh2aQ9CWY8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rnaseh2aQ9CWY8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC23.25■■□□□ 1.31
Rnaseh2aQ9CWY8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnaseh2aQ9CWY8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnaseh2aQ9CWY8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.24■■□□□ 1.31
Rnaseh2aQ9CWY8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnaseh2aQ9CWY8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnaseh2aQ9CWY8 Gm7860-201ENSMUST00000121190 879 ntBASIC23.24■■□□□ 1.31
Rnaseh2aQ9CWY8 Gm13158-201ENSMUST00000122007 736 ntBASIC23.24■■□□□ 1.31
Rnaseh2aQ9CWY8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Rnaseh2aQ9CWY8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Rnaseh2aQ9CWY8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnaseh2aQ9CWY8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Rnaseh2aQ9CWY8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
Rnaseh2aQ9CWY8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnaseh2aQ9CWY8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnaseh2aQ9CWY8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
Rnaseh2aQ9CWY8 Gm10517-202ENSMUST00000192970 758 ntBASIC23.23■■□□□ 1.31
Rnaseh2aQ9CWY8 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.23■■□□□ 1.31
Rnaseh2aQ9CWY8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnaseh2aQ9CWY8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Rnaseh2aQ9CWY8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnaseh2aQ9CWY8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rnaseh2aQ9CWY8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rnaseh2aQ9CWY8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rnaseh2aQ9CWY8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rnaseh2aQ9CWY8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Rnaseh2aQ9CWY8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnaseh2aQ9CWY8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnaseh2aQ9CWY8 Gm8668-201ENSMUST00000120559 1447 ntBASIC23.22■■□□□ 1.31
Rnaseh2aQ9CWY8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
Rnaseh2aQ9CWY8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnaseh2aQ9CWY8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC23.22■■□□□ 1.31
Rnaseh2aQ9CWY8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 Gm6659-201ENSMUST00000174752 547 ntBASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnaseh2aQ9CWY8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnaseh2aQ9CWY8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnaseh2aQ9CWY8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnaseh2aQ9CWY8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnaseh2aQ9CWY8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnaseh2aQ9CWY8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC23.2■■□□□ 1.3
Rnaseh2aQ9CWY8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rnaseh2aQ9CWY8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23.2■■□□□ 1.3
Rnaseh2aQ9CWY8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rnaseh2aQ9CWY8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.2■■□□□ 1.3
Rnaseh2aQ9CWY8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnaseh2aQ9CWY8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC23.19■■□□□ 1.3
Rnaseh2aQ9CWY8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnaseh2aQ9CWY8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC23.19■■□□□ 1.3
Rnaseh2aQ9CWY8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC23.19■■□□□ 1.3
Rnaseh2aQ9CWY8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnaseh2aQ9CWY8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms