Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TpbpbQ9CQC0 Gm43566-201ENSMUST00000196851 808 ntBASIC17.2■□□□□ 0.34
TpbpbQ9CQC0 Gm10232-201ENSMUST00000089221 720 ntBASIC17.2■□□□□ 0.34
TpbpbQ9CQC0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.2■□□□□ 0.34
TpbpbQ9CQC0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TpbpbQ9CQC0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.2■□□□□ 0.34
TpbpbQ9CQC0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TpbpbQ9CQC0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.2■□□□□ 0.34
TpbpbQ9CQC0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TpbpbQ9CQC0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TpbpbQ9CQC0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TpbpbQ9CQC0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TpbpbQ9CQC0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TpbpbQ9CQC0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TpbpbQ9CQC0 Golph3-205ENSMUST00000228671 2842 ntBASIC17.18■□□□□ 0.34
TpbpbQ9CQC0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TpbpbQ9CQC0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TpbpbQ9CQC0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.18■□□□□ 0.34
TpbpbQ9CQC0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TpbpbQ9CQC0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TpbpbQ9CQC0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TpbpbQ9CQC0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TpbpbQ9CQC0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.18■□□□□ 0.34
TpbpbQ9CQC0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TpbpbQ9CQC0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TpbpbQ9CQC0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TpbpbQ9CQC0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TpbpbQ9CQC0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TpbpbQ9CQC0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TpbpbQ9CQC0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TpbpbQ9CQC0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TpbpbQ9CQC0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TpbpbQ9CQC0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TpbpbQ9CQC0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TpbpbQ9CQC0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TpbpbQ9CQC0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TpbpbQ9CQC0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TpbpbQ9CQC0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TpbpbQ9CQC0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TpbpbQ9CQC0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.16■□□□□ 0.34
TpbpbQ9CQC0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.16■□□□□ 0.34
TpbpbQ9CQC0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.16■□□□□ 0.34
TpbpbQ9CQC0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TpbpbQ9CQC0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.16■□□□□ 0.34
TpbpbQ9CQC0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.16■□□□□ 0.34
TpbpbQ9CQC0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TpbpbQ9CQC0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
TpbpbQ9CQC0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TpbpbQ9CQC0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TpbpbQ9CQC0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TpbpbQ9CQC0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
TpbpbQ9CQC0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TpbpbQ9CQC0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TpbpbQ9CQC0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TpbpbQ9CQC0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TpbpbQ9CQC0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TpbpbQ9CQC0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TpbpbQ9CQC0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TpbpbQ9CQC0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TpbpbQ9CQC0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TpbpbQ9CQC0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TpbpbQ9CQC0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TpbpbQ9CQC0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TpbpbQ9CQC0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms