Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh18Q8VHR0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh18Q8VHR0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh18Q8VHR0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdh18Q8VHR0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh18Q8VHR0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdh18Q8VHR0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh18Q8VHR0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pcdh18Q8VHR0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh18Q8VHR0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh18Q8VHR0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh18Q8VHR0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh18Q8VHR0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh18Q8VHR0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdh18Q8VHR0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
Pcdh18Q8VHR0 Gm7417-201ENSMUST00000192950 473 ntBASIC18.5■□□□□ 0.55
Pcdh18Q8VHR0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh18Q8VHR0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdh18Q8VHR0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh18Q8VHR0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh18Q8VHR0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh18Q8VHR0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh18Q8VHR0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh18Q8VHR0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh18Q8VHR0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh18Q8VHR0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh18Q8VHR0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh18Q8VHR0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh18Q8VHR0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh18Q8VHR0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh18Q8VHR0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh18Q8VHR0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh18Q8VHR0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Etf1-202ENSMUST00000180351 108 ntBASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Pcdh18Q8VHR0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh18Q8VHR0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh18Q8VHR0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh18Q8VHR0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh18Q8VHR0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh18Q8VHR0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh18Q8VHR0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh18Q8VHR0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdh18Q8VHR0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdh18Q8VHR0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.46■□□□□ 0.55
Pcdh18Q8VHR0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdh18Q8VHR0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh18Q8VHR0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh18Q8VHR0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh18Q8VHR0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh18Q8VHR0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh18Q8VHR0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh18Q8VHR0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh18Q8VHR0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.45■□□□□ 0.54
Pcdh18Q8VHR0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh18Q8VHR0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh18Q8VHR0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh18Q8VHR0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh18Q8VHR0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh18Q8VHR0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh18Q8VHR0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Pcdh18Q8VHR0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh18Q8VHR0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh18Q8VHR0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh18Q8VHR0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh18Q8VHR0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdh18Q8VHR0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh18Q8VHR0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh18Q8VHR0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdh18Q8VHR0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdh18Q8VHR0 Gm9870-201ENSMUST00000063874 645 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms