Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab40bQ8VHP8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab40bQ8VHP8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rab40bQ8VHP8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.34■□□□□ 0.37
Rab40bQ8VHP8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab40bQ8VHP8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.34■□□□□ 0.37
Rab40bQ8VHP8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Rab40bQ8VHP8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab40bQ8VHP8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab40bQ8VHP8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Rab40bQ8VHP8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Rab40bQ8VHP8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab40bQ8VHP8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.33■□□□□ 0.36
Rab40bQ8VHP8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab40bQ8VHP8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rab40bQ8VHP8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.33■□□□□ 0.36
Rab40bQ8VHP8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab40bQ8VHP8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rab40bQ8VHP8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab40bQ8VHP8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab40bQ8VHP8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab40bQ8VHP8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40bQ8VHP8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40bQ8VHP8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40bQ8VHP8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40bQ8VHP8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40bQ8VHP8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rab40bQ8VHP8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40bQ8VHP8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40bQ8VHP8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Rab40bQ8VHP8 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.32■□□□□ 0.36
Rab40bQ8VHP8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40bQ8VHP8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40bQ8VHP8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40bQ8VHP8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.31■□□□□ 0.36
Rab40bQ8VHP8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40bQ8VHP8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab40bQ8VHP8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab40bQ8VHP8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab40bQ8VHP8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rab40bQ8VHP8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.29■□□□□ 0.36
Rab40bQ8VHP8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.29■□□□□ 0.36
Rab40bQ8VHP8 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.29■□□□□ 0.36
Rab40bQ8VHP8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab40bQ8VHP8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab40bQ8VHP8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rab40bQ8VHP8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.29■□□□□ 0.36
Rab40bQ8VHP8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40bQ8VHP8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.27■□□□□ 0.36
Rab40bQ8VHP8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms