Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC38A9Q8NBW4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
SLC38A9Q8NBW4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC38A9Q8NBW4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC38A9Q8NBW4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC38A9Q8NBW4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A9Q8NBW4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SLC38A9Q8NBW4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 AP004607.4-201ENST00000530158 1459 ntBASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A9Q8NBW4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A9Q8NBW4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A9Q8NBW4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC38A9Q8NBW4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A9Q8NBW4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
SLC38A9Q8NBW4 AC004854.2-201ENST00000608450 1441 ntBASIC20.58■□□□□ 0.88
SLC38A9Q8NBW4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC38A9Q8NBW4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SLC38A9Q8NBW4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A9Q8NBW4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A9Q8NBW4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SLC38A9Q8NBW4 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC38A9Q8NBW4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.57■□□□□ 0.88
SLC38A9Q8NBW4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.57■□□□□ 0.88
SLC38A9Q8NBW4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SLC38A9Q8NBW4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC38A9Q8NBW4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SLC38A9Q8NBW4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SLC38A9Q8NBW4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A9Q8NBW4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A9Q8NBW4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC38A9Q8NBW4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC38A9Q8NBW4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A9Q8NBW4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC38A9Q8NBW4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A9Q8NBW4 LINC01960-201ENST00000563759 1884 ntBASIC20.56■□□□□ 0.88
SLC38A9Q8NBW4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A9Q8NBW4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A9Q8NBW4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC38A9Q8NBW4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A9Q8NBW4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SLC38A9Q8NBW4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A9Q8NBW4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC38A9Q8NBW4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SLC38A9Q8NBW4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC38A9Q8NBW4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.55■□□□□ 0.88
SLC38A9Q8NBW4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC38A9Q8NBW4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A9Q8NBW4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SLC38A9Q8NBW4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A9Q8NBW4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A9Q8NBW4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC38A9Q8NBW4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A9Q8NBW4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC38A9Q8NBW4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A9Q8NBW4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SLC38A9Q8NBW4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A9Q8NBW4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A9Q8NBW4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SLC38A9Q8NBW4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC38A9Q8NBW4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC38A9Q8NBW4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A9Q8NBW4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A9Q8NBW4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A9Q8NBW4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SLC38A9Q8NBW4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC38A9Q8NBW4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
SLC38A9Q8NBW4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC38A9Q8NBW4 AC006015.1-201ENST00000429970 570 ntBASIC20.52■□□□□ 0.88
SLC38A9Q8NBW4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC38A9Q8NBW4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC38A9Q8NBW4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC38A9Q8NBW4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC38A9Q8NBW4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC38A9Q8NBW4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms