Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx54Q8K4L0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx54Q8K4L0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Ddx54Q8K4L0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx54Q8K4L0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx54Q8K4L0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx54Q8K4L0 Gm11249-201ENSMUST00000117071 859 ntBASIC25.49■■□□□ 1.67
Ddx54Q8K4L0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx54Q8K4L0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 Mir1199-201ENSMUST00000117015 119 ntBASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 Gm20472-201ENSMUST00000174403 1240 ntBASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 Gm10819-201ENSMUST00000099988 561 ntBASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx54Q8K4L0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx54Q8K4L0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25.47■■□□□ 1.67
Ddx54Q8K4L0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx54Q8K4L0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx54Q8K4L0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx54Q8K4L0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC25.47■■□□□ 1.67
Ddx54Q8K4L0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx54Q8K4L0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx54Q8K4L0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Ddx54Q8K4L0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx54Q8K4L0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx54Q8K4L0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx54Q8K4L0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx54Q8K4L0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx54Q8K4L0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx54Q8K4L0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx54Q8K4L0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx54Q8K4L0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Ddx54Q8K4L0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx54Q8K4L0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Ddx54Q8K4L0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.67
Ddx54Q8K4L0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx54Q8K4L0 Gm7860-201ENSMUST00000121190 879 ntBASIC25.45■■□□□ 1.66
Ddx54Q8K4L0 Gm15378-201ENSMUST00000121894 207 ntBASIC25.45■■□□□ 1.66
Ddx54Q8K4L0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Ddx54Q8K4L0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx54Q8K4L0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
Ddx54Q8K4L0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC25.45■■□□□ 1.66
Ddx54Q8K4L0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC25.44■■□□□ 1.66
Ddx54Q8K4L0 Gm21596-201ENSMUST00000178049 1316 ntBASIC25.44■■□□□ 1.66
Ddx54Q8K4L0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ddx54Q8K4L0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC25.44■■□□□ 1.66
Ddx54Q8K4L0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ddx54Q8K4L0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC25.44■■□□□ 1.66
Ddx54Q8K4L0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx54Q8K4L0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx54Q8K4L0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx54Q8K4L0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC25.43■■□□□ 1.66
Ddx54Q8K4L0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
Ddx54Q8K4L0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
Ddx54Q8K4L0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx54Q8K4L0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx54Q8K4L0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx54Q8K4L0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx54Q8K4L0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx54Q8K4L0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
Ddx54Q8K4L0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx54Q8K4L0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC25.42■■□□□ 1.66
Ddx54Q8K4L0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx54Q8K4L0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC25.42■■□□□ 1.66
Ddx54Q8K4L0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx54Q8K4L0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC25.42■■□□□ 1.66
Ddx54Q8K4L0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx54Q8K4L0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx54Q8K4L0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx54Q8K4L0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx54Q8K4L0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx54Q8K4L0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx54Q8K4L0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx54Q8K4L0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx54Q8K4L0 Gm10231-201ENSMUST00000181584 441 ntBASIC25.41■■□□□ 1.66
Ddx54Q8K4L0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx54Q8K4L0 Gm10175-202ENSMUST00000208752 441 ntBASIC25.41■■□□□ 1.66
Ddx54Q8K4L0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx54Q8K4L0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx54Q8K4L0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx54Q8K4L0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx54Q8K4L0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx54Q8K4L0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx54Q8K4L0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx54Q8K4L0 AA386476-201ENSMUST00000098781 1665 ntBASIC25.4■■□□□ 1.66
Ddx54Q8K4L0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC25.4■■□□□ 1.66
Ddx54Q8K4L0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.4■■□□□ 1.66
Ddx54Q8K4L0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx54Q8K4L0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx54Q8K4L0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
Ddx54Q8K4L0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Ddx54Q8K4L0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms