Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Syne4Q8CII8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Syne4Q8CII8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Syne4Q8CII8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Syne4Q8CII8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
Syne4Q8CII8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Syne4Q8CII8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Syne4Q8CII8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Syne4Q8CII8 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.98■■□□□ 1.11
Syne4Q8CII8 Gm7977-201ENSMUST00000193787 748 ntBASIC21.98■■□□□ 1.11
Syne4Q8CII8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.98■■□□□ 1.11
Syne4Q8CII8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Syne4Q8CII8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Syne4Q8CII8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Syne4Q8CII8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Syne4Q8CII8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Syne4Q8CII8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Syne4Q8CII8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Syne4Q8CII8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Syne4Q8CII8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.97■■□□□ 1.11
Syne4Q8CII8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Syne4Q8CII8 Gm12896-201ENSMUST00000118430 226 ntBASIC21.97■■□□□ 1.11
Syne4Q8CII8 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.97■■□□□ 1.11
Syne4Q8CII8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Syne4Q8CII8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.97■■□□□ 1.11
Syne4Q8CII8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
Syne4Q8CII8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Syne4Q8CII8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Syne4Q8CII8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Syne4Q8CII8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.96■■□□□ 1.11
Syne4Q8CII8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Syne4Q8CII8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Syne4Q8CII8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Syne4Q8CII8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Syne4Q8CII8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Syne4Q8CII8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Syne4Q8CII8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Syne4Q8CII8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Syne4Q8CII8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Syne4Q8CII8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Syne4Q8CII8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
Syne4Q8CII8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Syne4Q8CII8 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.95■■□□□ 1.1
Syne4Q8CII8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Syne4Q8CII8 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.95■■□□□ 1.1
Syne4Q8CII8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Syne4Q8CII8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Syne4Q8CII8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Syne4Q8CII8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.94■■□□□ 1.1
Syne4Q8CII8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Syne4Q8CII8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.94■■□□□ 1.1
Syne4Q8CII8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Syne4Q8CII8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Syne4Q8CII8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Syne4Q8CII8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Syne4Q8CII8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Syne4Q8CII8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Syne4Q8CII8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.93■■□□□ 1.1
Syne4Q8CII8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Syne4Q8CII8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Syne4Q8CII8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Syne4Q8CII8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Syne4Q8CII8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Syne4Q8CII8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Syne4Q8CII8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Syne4Q8CII8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Syne4Q8CII8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Syne4Q8CII8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Gm5643-201ENSMUST00000117081 966 ntBASIC21.91■■□□□ 1.1
Syne4Q8CII8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
Syne4Q8CII8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.9■■□□□ 1.1
Syne4Q8CII8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Syne4Q8CII8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms