Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slc46a2Q8CA03 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Slc46a2Q8CA03 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slc46a2Q8CA03 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a2Q8CA03 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc46a2Q8CA03 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.49■□□□□ 0.55
Slc46a2Q8CA03 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Slc46a2Q8CA03 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc46a2Q8CA03 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.49■□□□□ 0.55
Slc46a2Q8CA03 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc46a2Q8CA03 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.49■□□□□ 0.55
Slc46a2Q8CA03 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.49■□□□□ 0.55
Slc46a2Q8CA03 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.49■□□□□ 0.55
Slc46a2Q8CA03 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.49■□□□□ 0.55
Slc46a2Q8CA03 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.49■□□□□ 0.55
Slc46a2Q8CA03 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc46a2Q8CA03 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc46a2Q8CA03 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc46a2Q8CA03 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.48■□□□□ 0.55
Slc46a2Q8CA03 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a2Q8CA03 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a2Q8CA03 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a2Q8CA03 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a2Q8CA03 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.48■□□□□ 0.55
Slc46a2Q8CA03 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a2Q8CA03 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a2Q8CA03 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.48■□□□□ 0.55
Slc46a2Q8CA03 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a2Q8CA03 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Slc46a2Q8CA03 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a2Q8CA03 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.48■□□□□ 0.55
Slc46a2Q8CA03 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 Rps24-207ENSMUST00000224568 714 ntBASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc46a2Q8CA03 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slc46a2Q8CA03 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Slc46a2Q8CA03 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc46a2Q8CA03 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc46a2Q8CA03 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc46a2Q8CA03 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.46■□□□□ 0.55
Slc46a2Q8CA03 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc46a2Q8CA03 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slc46a2Q8CA03 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slc46a2Q8CA03 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc46a2Q8CA03 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc46a2Q8CA03 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Slc46a2Q8CA03 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc46a2Q8CA03 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc46a2Q8CA03 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.45■□□□□ 0.54
Slc46a2Q8CA03 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc46a2Q8CA03 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc46a2Q8CA03 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.45■□□□□ 0.54
Slc46a2Q8CA03 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc46a2Q8CA03 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc46a2Q8CA03 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms