Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rft1Q8C3B8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rft1Q8C3B8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rft1Q8C3B8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rft1Q8C3B8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rft1Q8C3B8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rft1Q8C3B8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rft1Q8C3B8 Gm21956-201ENSMUST00000179946 522 ntBASIC17.12■□□□□ 0.33
Rft1Q8C3B8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rft1Q8C3B8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rft1Q8C3B8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rft1Q8C3B8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rft1Q8C3B8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rft1Q8C3B8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rft1Q8C3B8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rft1Q8C3B8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rft1Q8C3B8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.11■□□□□ 0.33
Rft1Q8C3B8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rft1Q8C3B8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rft1Q8C3B8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.11■□□□□ 0.33
Rft1Q8C3B8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.11■□□□□ 0.33
Rft1Q8C3B8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rft1Q8C3B8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rft1Q8C3B8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rft1Q8C3B8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rft1Q8C3B8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rft1Q8C3B8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rft1Q8C3B8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rft1Q8C3B8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rft1Q8C3B8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rft1Q8C3B8 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.09■□□□□ 0.33
Rft1Q8C3B8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rft1Q8C3B8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.09■□□□□ 0.33
Rft1Q8C3B8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Rft1Q8C3B8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rft1Q8C3B8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rft1Q8C3B8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rft1Q8C3B8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rft1Q8C3B8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rft1Q8C3B8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rft1Q8C3B8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rft1Q8C3B8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Rft1Q8C3B8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rft1Q8C3B8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rft1Q8C3B8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rft1Q8C3B8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.08■□□□□ 0.33
Rft1Q8C3B8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rft1Q8C3B8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rft1Q8C3B8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.07■□□□□ 0.32
Rft1Q8C3B8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rft1Q8C3B8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.07■□□□□ 0.32
Rft1Q8C3B8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rft1Q8C3B8 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.07■□□□□ 0.32
Rft1Q8C3B8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rft1Q8C3B8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rft1Q8C3B8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rft1Q8C3B8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.07■□□□□ 0.32
Rft1Q8C3B8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.06■□□□□ 0.32
Rft1Q8C3B8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rft1Q8C3B8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rft1Q8C3B8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rft1Q8C3B8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rft1Q8C3B8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rft1Q8C3B8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rft1Q8C3B8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rft1Q8C3B8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rft1Q8C3B8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms