Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NIPAL3Q6P499 AC092171.4-201ENST00000609130 632 ntBASIC19.76■□□□□ 0.75
NIPAL3Q6P499 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NIPAL3Q6P499 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
NIPAL3Q6P499 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NIPAL3Q6P499 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NIPAL3Q6P499 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.76■□□□□ 0.75
NIPAL3Q6P499 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NIPAL3Q6P499 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.76■□□□□ 0.75
NIPAL3Q6P499 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NIPAL3Q6P499 AL137060.1-201ENST00000618151 2648 ntBASIC19.75■□□□□ 0.75
NIPAL3Q6P499 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 AC006455.2-201ENST00000429931 906 ntBASIC19.75■□□□□ 0.75
NIPAL3Q6P499 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NIPAL3Q6P499 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPAL3Q6P499 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NIPAL3Q6P499 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.73■□□□□ 0.75
NIPAL3Q6P499 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NIPAL3Q6P499 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.73■□□□□ 0.75
NIPAL3Q6P499 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NIPAL3Q6P499 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NIPAL3Q6P499 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NIPAL3Q6P499 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NIPAL3Q6P499 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.73■□□□□ 0.75
NIPAL3Q6P499 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 pRNA.6-201ENST00000610482 90 ntBASIC19.72■□□□□ 0.75
NIPAL3Q6P499 pRNA.5-201ENST00000612139 90 ntBASIC19.72■□□□□ 0.75
NIPAL3Q6P499 pRNA.11-201ENST00000618423 90 ntBASIC19.72■□□□□ 0.75
NIPAL3Q6P499 pRNA.13-201ENST00000619112 90 ntBASIC19.72■□□□□ 0.75
NIPAL3Q6P499 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPAL3Q6P499 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
NIPAL3Q6P499 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NIPAL3Q6P499 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.71■□□□□ 0.75
NIPAL3Q6P499 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NIPAL3Q6P499 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NIPAL3Q6P499 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NIPAL3Q6P499 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.71■□□□□ 0.75
NIPAL3Q6P499 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.71■□□□□ 0.75
NIPAL3Q6P499 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.71■□□□□ 0.75
NIPAL3Q6P499 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
NIPAL3Q6P499 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NIPAL3Q6P499 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.71■□□□□ 0.75
NIPAL3Q6P499 LINC01960-201ENST00000563759 1884 ntBASIC19.71■□□□□ 0.75
NIPAL3Q6P499 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.71■□□□□ 0.75
NIPAL3Q6P499 SYT6-210ENST00000641643 1587 ntBASIC19.7■□□□□ 0.74
NIPAL3Q6P499 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NIPAL3Q6P499 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.7■□□□□ 0.74
NIPAL3Q6P499 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NIPAL3Q6P499 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.7■□□□□ 0.74
NIPAL3Q6P499 DUX4L19-201ENST00000557448 1267 ntBASIC19.7■□□□□ 0.74
NIPAL3Q6P499 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NIPAL3Q6P499 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
NIPAL3Q6P499 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.7■□□□□ 0.74
NIPAL3Q6P499 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NIPAL3Q6P499 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.7■□□□□ 0.74
NIPAL3Q6P499 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NIPAL3Q6P499 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NIPAL3Q6P499 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NIPAL3Q6P499 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NIPAL3Q6P499 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.69■□□□□ 0.74
NIPAL3Q6P499 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.69■□□□□ 0.74
NIPAL3Q6P499 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms