Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.46■■□□□ 1.03
SH2D4BQ5SQS7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH2D4BQ5SQS7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
SH2D4BQ5SQS7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4BQ5SQS7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4BQ5SQS7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.45■■□□□ 1.02
SH2D4BQ5SQS7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.45■■□□□ 1.02
SH2D4BQ5SQS7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.45■■□□□ 1.02
SH2D4BQ5SQS7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4BQ5SQS7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4BQ5SQS7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4BQ5SQS7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4BQ5SQS7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SH2D4BQ5SQS7 LINC01960-201ENST00000563759 1884 ntBASIC21.45■■□□□ 1.02
SH2D4BQ5SQS7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4BQ5SQS7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SH2D4BQ5SQS7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.44■■□□□ 1.02
SH2D4BQ5SQS7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SH2D4BQ5SQS7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.44■■□□□ 1.02
SH2D4BQ5SQS7 MIR6722-201ENST00000617286 78 ntBASIC21.44■■□□□ 1.02
SH2D4BQ5SQS7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH2D4BQ5SQS7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH2D4BQ5SQS7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SH2D4BQ5SQS7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4BQ5SQS7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4BQ5SQS7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.43■■□□□ 1.02
SH2D4BQ5SQS7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4BQ5SQS7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SH2D4BQ5SQS7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4BQ5SQS7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4BQ5SQS7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4BQ5SQS7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4BQ5SQS7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
SH2D4BQ5SQS7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.43■■□□□ 1.02
SH2D4BQ5SQS7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4BQ5SQS7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4BQ5SQS7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.42■■□□□ 1.02
SH2D4BQ5SQS7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4BQ5SQS7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4BQ5SQS7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4BQ5SQS7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4BQ5SQS7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4BQ5SQS7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
SH2D4BQ5SQS7 RNF165-205ENST00000588679 2904 ntBASIC21.42■■□□□ 1.02
SH2D4BQ5SQS7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 AC009086.3-201ENST00000623486 1008 ntBASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4BQ5SQS7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4BQ5SQS7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.4■■□□□ 1.02
SH2D4BQ5SQS7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
SH2D4BQ5SQS7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4BQ5SQS7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4BQ5SQS7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SH2D4BQ5SQS7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.4■■□□□ 1.02
SH2D4BQ5SQS7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.4■■□□□ 1.02
SH2D4BQ5SQS7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SH2D4BQ5SQS7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
SH2D4BQ5SQS7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH2D4BQ5SQS7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH2D4BQ5SQS7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.39■■□□□ 1.02
SH2D4BQ5SQS7 AC021242.3-201ENST00000607598 1377 ntBASIC21.39■■□□□ 1.02
SH2D4BQ5SQS7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH2D4BQ5SQS7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SH2D4BQ5SQS7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH2D4BQ5SQS7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH2D4BQ5SQS7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH2D4BQ5SQS7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SH2D4BQ5SQS7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
SH2D4BQ5SQS7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH2D4BQ5SQS7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.39■■□□□ 1.01
SH2D4BQ5SQS7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.38■■□□□ 1.01
SH2D4BQ5SQS7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH2D4BQ5SQS7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.38■■□□□ 1.01
SH2D4BQ5SQS7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SH2D4BQ5SQS7 DUX4L4-201ENST00000566884 1269 ntBASIC21.38■■□□□ 1.01
SH2D4BQ5SQS7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH2D4BQ5SQS7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SH2D4BQ5SQS7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH2D4BQ5SQS7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
SH2D4BQ5SQS7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.38■■□□□ 1.01
SH2D4BQ5SQS7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH2D4BQ5SQS7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH2D4BQ5SQS7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH2D4BQ5SQS7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH2D4BQ5SQS7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH2D4BQ5SQS7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH2D4BQ5SQS7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH2D4BQ5SQS7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms