Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-3Q5R1C3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-3Q5R1C3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-3Q5R1C3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-3Q5R1C3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-3Q5R1C3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-3Q5R1C3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-3Q5R1C3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-3Q5R1C3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-3Q5R1C3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav3-3Q5R1C3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-3Q5R1C3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-3Q5R1C3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav3-3Q5R1C3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav3-3Q5R1C3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-3Q5R1C3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-3Q5R1C3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-3Q5R1C3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-3Q5R1C3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-3Q5R1C3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-3Q5R1C3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-3Q5R1C3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-3Q5R1C3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-3Q5R1C3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-3Q5R1C3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-3Q5R1C3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.42□□□□□ -0.1
Trav3-3Q5R1C3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-3Q5R1C3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-3Q5R1C3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-3Q5R1C3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav3-3Q5R1C3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-3Q5R1C3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav3-3Q5R1C3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-3Q5R1C3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.4□□□□□ -0.1
Trav3-3Q5R1C3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-3Q5R1C3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-3Q5R1C3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-3Q5R1C3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.4□□□□□ -0.11
Trav3-3Q5R1C3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-3Q5R1C3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3-3Q5R1C3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms